RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LINC00471Q8N535 108 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 TMEM106AQ96A25 262 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 ADAT1Q9BUB4 502 aaKnown RBP1.28□□□□□ -2.2
CLK1-213ENST00000492793 COMMD5Q9GZQ3 224 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 PKIGQ9Y2B9 76 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 NOSIPQ9Y314 301 aaKnown RBP1.28□□□□□ -2.2
CLK1-213ENST00000492793 ANAPC1Q9H1A4 1944 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 MAP3K5Q99683 1374 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 TTC21AQ8NDW8 1320 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 TRAPPC13A5PLN9 417 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 TMEM212A6NML5 194 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HLA-DRB1P01911 266 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 IL9P15248 144 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BOP23527 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BBP33778 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 SULT1A1P50225 295 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BDP58876 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 DEFA1P59665 94 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BCP62807 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 CCL20P78556 96 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 ITGB3BPQ13352 177 aaPredicted RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST2H2BEQ16778 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 IBA57Q5T440 356 aaKnown RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 RPL22L1Q6P5R6 122 aaKnown RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 ANKRD29Q8N6D5 301 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 MRPL30Q8TCC3 161 aaKnown RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 DNAJC9Q8WXX5 260 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 C11orf40Q8WZ69 217 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BHQ93079 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 IMP4Q96G21 291 aaKnown RBP1.27□□□□□ -2.21
CLK1-213ENST00000492793 CCDC42Q96M95 316 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BNQ99877 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 HIST1H2BMQ99879 126 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 PRTFDC1Q9NRG1 225 aa1.27□□□□□ -2.21
CLK1-213ENST00000492793 ADCY9O60503 1353 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 PSME3P61289 254 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 OR2F1Q13607 317 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 ZNF345Q14585 488 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 CDK10Q15131 360 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 KISS1Q15726 138 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 KCNJ8Q15842 424 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 SYPL2Q5VXT5 272 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 SPOPLQ6IQ16 392 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 LPCAT3Q6P1A2 487 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
CLK1-213ENST00000492793 DCUN1D1Q96GG9 259 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 PPP1R2P1Q96PQ5 205 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 OR52E6Q96RD3 313 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 SERPINI1Q99574 410 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 DERL1Q9BUN8 251 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 ULBP3Q9BZM4 244 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 YIPF3Q9GZM5 350 aa1.26□□□□□ -2.21
CLK1-213ENST00000492793 SETD5Q9C0A6 1442 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 TRAV14DV4A0A0A6YYC5 116 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 IGKV1D-43A0A0B4J1Z2 117 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 LYPLA2O95372 231 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 CRYZL1O95825 349 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 IFNA16P05015 189 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 STX5Q13190 355 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 ALKAL1Q6UXT8 129 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 CLVS1Q8IUQ0 354 aaPredicted RBP1.25□□□□□ -2.21
CLK1-213ENST00000492793 C20orf196Q8IYI0 205 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 TMEM86BQ8N661 226 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 RASSF5Q8WWW0 418 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 PPP1R14BQ96C90 147 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 SCGB3A1Q96QR1 104 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 CYSTM1Q9H1C7 97 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 GLI3P10071 1580 aa1.25□□□□□ -2.21
CLK1-213ENST00000492793 SNAPC4Q5SXM2 1469 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
CLK1-213ENST00000492793 ALPK2Q86TB3 2170 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 OR5F1O95221 314 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 ZNF80P51504 273 aaPredicted RBP1.24□□□□□ -2.21
CLK1-213ENST00000492793 CEBPGP53567 150 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 SNRPD2P62316 118 aaKnown RBP1.24□□□□□ -2.21
CLK1-213ENST00000492793 SPANXN3Q5MJ09 141 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 LCN15Q6UWW0 184 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 DPPA3Q6W0C5 159 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 TRAPPC5Q8IUR0 188 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 C15orf53Q8NAA6 179 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 PARD6GQ9BYG4 376 aaPredicted RBP1.24□□□□□ -2.21
CLK1-213ENST00000492793 REG4Q9BYZ8 158 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 C11orf68Q9H3H3 251 aaKnown RBP1.24□□□□□ -2.21
CLK1-213ENST00000492793 FBXL12Q9NXK8 326 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 UBAP1Q9NZ09 502 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 VPS29Q9UBQ0 182 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 CKLFQ9UBR5 152 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 LHFPL6Q9Y693 200 aa1.24□□□□□ -2.21
CLK1-213ENST00000492793 TONSLQ96HA7 1378 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 COL6A6A6NMZ7 2263 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
CLK1-213ENST00000492793 SMARCA4P51532 1647 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 TRAV9-1A0A075B6T8 112 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 FUOMA2VDF0 154 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 DPRXA6NFQ7 191 aa1.23□□□□□ -2.21
CLK1-213ENST00000492793 FAAHO00519 579 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms