RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 TEX36Q5VZQ5 186 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
SEMA4D-220ENST00000492386 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 CD40P25942 277 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 GATA2P23769 480 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 OR10J1P30954 320 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 OR5I1Q13606 314 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 Q6ZS92 163 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 V9GYV3 84 aa13.14□□□□□ -0.31
SEMA4D-220ENST00000492386 A8MXE2 369 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 RNASE2P10153 161 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 TNFSF4P23510 183 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 LINC00310P59036 64 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 MLANAQ16655 118 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 ZNF833PQ6ZTB9 187 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 RND1Q92730 232 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 hADV38S2A0JD32 116 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 FRMD6-AS1P0C7T7 363 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 CRYBB3P26998 211 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 OR1L8Q8NGR8 309 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 OR9G1Q8NH87 305 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 MRPL18Q9H0U6 180 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 LINC00312Q9Y6C7 94 aa13.13□□□□□ -0.31
SEMA4D-220ENST00000492386 HELTA6NFD8 242 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 SCGB1D1O95968 90 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 OR5G3P0C626 314 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 GNG4P50150 75 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 ERVFC1-1P60608 527 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 RPEL1Q2QD12 228 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 PNKDQ8N490 385 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 OR1L6Q8NGR2 347 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 MS4A10Q96PG2 267 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 IRF2P14316 349 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 NDUFB7P17568 137 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 LBHQ53QV2 105 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 MRPL20Q9BYC9 149 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-220ENST00000492386 GGTLC3B5MD39 225 aa13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 OR10J4P0C629 311 aa13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 CD69Q07108 199 aa13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 PQLC2Q6ZP29 291 aa13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 POLR3KQ9Y2Y1 108 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-220ENST00000492386 K7EM74 188 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 OR7C2O60412 319 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 ESDP10768 282 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 CCL8P80075 99 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 OSR1Q8TAX0 266 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 C19orf24Q9BVV8 132 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 RNF224P0DH78 156 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 IER3P46695 156 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 TAS2R60P59551 318 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 NDUFA4L2Q9NRX3 87 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 CUL9Q8IWT3 2517 aa13.1□□□□□ -0.31
SEMA4D-220ENST00000492386 RP1L1Q8IWN7 2480 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 FCN3O75636 299 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 CRISP2P16562 243 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 DOLPP1Q86YN1 238 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 OR8I2Q8N0Y5 310 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 RBMXL3Q8N7X1 1067 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 SLC25A33Q9BSK2 321 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 TTC28Q96AY4 2481 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 NKX6-3A6NJ46 265 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 H0YJW9 148 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 FCN1O00602 326 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 TAS2R45P59539 299 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 C1orf194Q5T5A4 169 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 ST6GALNAC3Q8NDV1 305 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 HARBI1Q96MB7 349 aa13.09□□□□□ -0.31
SEMA4D-220ENST00000492386 SERF1AO75920 110 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 CCL3L1P16619 93 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 CHRNB4P30926 498 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 SSTP61278 116 aa13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 MEF2CQ06413 473 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-220ENST00000492386 Q6ZWC4 215 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms