RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNF585BQ52M93 769 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 NFAM1Q8NET5 270 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF407Q9C0G0 2248 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 OR4F17Q8NGA8 305 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 YPEL1O60688 119 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 RCHY1Q96PM5 261 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 YPEL2Q96QA6 119 aa9.44□□□□□ -0.9
CRNKL1-204ENST00000490910 TNFSF15O95150 251 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 GATA2P23769 480 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF826PQ6ZT77 177 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 FZR1Q9UM11 496 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 CHCHD2Q9Y6H1 151 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 IGLV3-32A0A0A0MS00 114 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 KLF7O75840 302 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 REG1AP05451 166 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 AREGP15514 252 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 FADS6Q8N9I5 356 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 OR4X2Q8NGF9 303 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 OR1L8Q8NGR8 309 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 DEFB127Q9H1M4 99 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 AAMDCQ9H7C9 122 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 hADV38S2A0JD32 116 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 IGKV1-39P01597 117 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 IGKV1D-39P04432 117 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 HSD52Q0P140 79 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 SLC35E4Q6ICL7 350 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 MDP1Q86V88 176 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 TMEM116Q8NCL8 245 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 VSTM2AQ8TAG5 236 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 MGST2Q99735 147 aa9.43□□□□□ -0.9
CRNKL1-204ENST00000490910 SLC25A17O43808 307 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 PPBPP02775 128 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 VMA21Q3ZAQ7 101 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TIMM23BQ5SRD1 257 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 LYZP61626 148 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 RPL30P62888 115 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TNFRSF14Q92956 283 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 VWCEQ96DN2 955 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 PHF7Q9BWX1 381 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TNFRSF19Q9NS68 423 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 OR2J3O76001 311 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 MT-CO3P00414 261 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF146Q15072 292 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 A0A1B0GWB2 263 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TIAF1O95411 115 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TOMM40O96008 361 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 ALKBH6Q3KRA9 238 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 WFDC8Q8IUA0 241 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 HARBI1Q96MB7 349 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 V9GYV3 84 aa9.42□□□□□ -0.9
CRNKL1-204ENST00000490910 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 OR9G9P0C7N8 305 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 CKS1BP61024 79 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 BVES-AS1Q5T3Y7 98 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 FGFBP3Q8TAT2 258 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 NCOA6Q14686 2063 aaPredicted RBP9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 FOXH1O75593 365 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 RBP4P02753 201 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 PAX1P15863 534 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 NPPCP23582 126 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 PRDX2P32119 198 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 CXCL12P48061 93 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 CLDN18P56856 261 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 IL11RAQ14626 422 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 ZIC4Q8N9L1 334 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 ZNF318Q5VUA4 2279 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 ICE1Q9Y2F5 2266 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 LYZL6O75951 148 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 CNIH1O95406 144 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 IGLV3-1P01715 115 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 BHLHA15Q7RTS1 189 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 234.8 ms