RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SSSCA1O60232 199 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 OR2J3O76001 311 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 IGHV3-11P01762 117 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 IGHG4P01861 327 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 NKX2-1P43699 371 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-208ENST00000482310 S100A10P60903 97 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 ERHP84090 104 aaKnown RBP10.32□□□□□ -0.76
HDAC1-208ENST00000482310 FOXE3Q13461 319 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 TTC9CQ8N5M4 171 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 TMEM68Q96MH6 324 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 MED28Q9H204 178 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 PAIP2BQ9ULR5 123 aaKnown RBP10.32□□□□□ -0.76
HDAC1-208ENST00000482310 LSM5Q9Y4Y9 91 aaKnown RBP10.32□□□□□ -0.76
HDAC1-208ENST00000482310 WNK1Q9H4A3 2382 aa10.32□□□□□ -0.76
HDAC1-208ENST00000482310 hCG_2014768A0A024R1R8 64 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 PITX3O75364 302 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 IGHV3-23P01764 117 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 SLC25A6P12236 298 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 CTRB1P17538 263 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 PSMB8P28062 276 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 RAB9AP51151 201 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 POLR2GP62487 172 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC1-208ENST00000482310 FCN2Q15485 313 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 LRRC37A5PQ49AS3 106 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 CTRB2Q6GPI1 263 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 SLC25A24Q6NUK1 477 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 MRPL41Q8IXM3 137 aaKnown RBP10.31□□□□□ -0.76
HDAC1-208ENST00000482310 OR2C3Q8N628 320 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 OR4D5Q8NGN0 318 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 OR52E5Q8NH55 327 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 DTD1Q8TEA8 209 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
HDAC1-208ENST00000482310 GNB4Q9HAV0 340 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 HSPB7Q9UBY9 170 aa10.31□□□□□ -0.76
HDAC1-208ENST00000482310 H3BP45 60 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 ELANEP08246 267 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 SNCAP37840 140 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 MFAP2P55001 183 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 RHOGP84095 191 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 PINX1Q96BK5 328 aaKnown RBP10.3□□□□□ -0.76
HDAC1-208ENST00000482310 C2orf50Q96LR7 162 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 P2RX4Q99571 388 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 SRSF8Q9BRL6 282 aaKnown RBP10.3□□□□□ -0.76
HDAC1-208ENST00000482310 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 RCL1Q9Y2P8 373 aaKnown RBP10.3□□□□□ -0.76
HDAC1-208ENST00000482310 DMRT1Q9Y5R6 373 aa10.3□□□□□ -0.76
HDAC1-208ENST00000482310 SYNGR2O43760 224 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 MED6O75586 246 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 IFNA10P01566 189 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 IGHV3-48P01763 117 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-208ENST00000482310 CRYGCP07315 174 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 CXCL3P19876 107 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 H2BFSP57053 126 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 RPL23AP62750 156 aaKnown RBP10.29□□□□□ -0.76
HDAC1-208ENST00000482310 CD83Q01151 205 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 AARDQ4LEZ3 155 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 HSD17B13Q7Z5P4 300 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-208ENST00000482310 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 OR11H7Q8NGC8 314 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 CITED1Q99966 193 aa10.29□□□□□ -0.76
HDAC1-208ENST00000482310 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-208ENST00000482310 F11RQ9Y624 299 aaKnown RBP10.29□□□□□ -0.76
HDAC1-208ENST00000482310 IGLV11-55A0A075B6I3 123 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 ANKRD34BA5PLL1 514 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 K7EPK0 472 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 NDUFB8O95169 186 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 RNASE2P10153 161 aaKnown RBP10.28□□□□□ -0.76
HDAC1-208ENST00000482310 RRAS2P62070 204 aaPredicted RBP10.28□□□□□ -0.76
HDAC1-208ENST00000482310 RAB32Q13637 225 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 EXOSC2Q13868 293 aaKnown RBP10.28□□□□□ -0.76
HDAC1-208ENST00000482310 C15orf32Q32M92 178 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 ZNF491Q8N8L2 437 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
HDAC1-208ENST00000482310 MFSD2BA6NFX1 497 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 H3BUA1 57 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 CYB5BO43169 146 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 NPY1RP25929 384 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 SUB1P53999 127 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC1-208ENST00000482310 ID3Q02535 119 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 ATP5G2Q06055 141 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 PDLIM3Q53GG5 364 aaPredicted RBP10.27□□□□□ -0.77
HDAC1-208ENST00000482310 SPANXN5Q5MJ07 72 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 NDUFA11Q86Y39 141 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 UBAC2Q8NBM4 344 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 OR1P1Q8NH06 330 aa10.27□□□□□ -0.77
HDAC1-208ENST00000482310 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms