RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C9orf50Q5SZB4 431 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 SSMEM1Q8WWF3 244 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 GDF15Q99988 308 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TMEM30AQ9NV96 361 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 RBPJLQ9UBG7 517 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 NEU3Q9UQ49 428 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 SPTBN2O15020 2390 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TRBV7-1A0A0A6YYK4 115 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TRAV12-3A0A0B4J271 114 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 PPIAL4CA0A0B4J2A2 164 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 PPIAL4GP0DN37 164 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ZNF880Q6PDB4 577 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 NRAPQ86VF7 1730 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 H3BQ15 152 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 GPX3P22352 226 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 CLDN12P56749 244 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 PPP1R27Q86WC6 154 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 PATE1Q8WXA2 126 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ZNF319Q9P2F9 582 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 HCFC2Q9Y5Z7 792 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 SBF2Q86WG5 1849 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 MON2Q7Z3U7 1717 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TRBV5-4A0A0C4DH59 114 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 A0A1B0GX51 115 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 NDUFA4O00483 81 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 MOSP00540 346 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ATP5G1P05496 136 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ATP5G3P48201 142 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TFPI2P48307 235 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ZNF117Q03924 483 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 WDR82Q6UXN9 313 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 CT55Q8WUE5 264 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 ZNF703Q9H7S9 590 aaPredicted RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 BCL9O00512 1426 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 RREB1Q92766 1687 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 FREM3P0C091 2139 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 LIPT2A6NK58 231 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CDC42EP2O14613 210 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 IGKCP01834 107 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 AWAT1Q58HT5 328 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 TMEM256Q8N2U0 113 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CCDC140Q96MF4 163 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 RND2P52198 227 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 TAL2Q16559 108 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CADM3Q8N126 398 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 PGLYRP3Q96LB9 341 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 INSM2Q96T92 566 aaPredicted RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 LRRC37A3O60309 1634 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 TRBV5-7A0A0A0MS05 114 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 RNASE4P34096 147 aaKnown RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 SPATA46Q5T0L3 261 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 MARVELD3Q96A59 401 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 F11RQ9Y624 299 aaKnown RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 A0A1B0GV90 55 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 H3BP45 60 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CD7P09564 240 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 FOXG1P55316 489 aaPredicted RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 OTPQ5XKR4 325 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 PAQR9Q6ZVX9 377 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 SIGLEC11Q96RL6 698 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 DUSP15Q9H1R2 295 aaPredicted RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 FOXJ2Q9P0K8 574 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 PLXNA1Q9UIW2 1896 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 IGHG2P01859 326 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 C5orf47Q569G3 176 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 MYEOVQ96EZ4 313 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 RHOVQ96L33 236 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 RETNQ9HD89 108 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 ZNF114Q8NC26 417 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 ZNF775Q96BV0 537 aaPredicted RBP4.63□□□□□ -1.67
USF3-202ENST00000478658 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CLEC2DQ9UHP7 191 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 C5P01031 1676 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 CADP27708 2225 aa4.63□□□□□ -1.67
USF3-202ENST00000478658 TRAV8-1A0A0A6YYK1 113 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 MED19A0JLT2 244 aaPredicted RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 FAM223BA6NKX1 122 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 F6UB75 175 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 FAM223AQ8IWN6 122 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 RLN3Q8WXF3 142 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 MRPL36Q9P0J6 103 aaKnown RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 FBLN5Q9UBX5 448 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 ST6GALNAC2Q9UJ37 374 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 KNCNA6PVL3 124 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TMEM155Q4W5P6 130 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TEX36Q5VZQ5 186 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 WBP1Q96G27 269 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 RSPO3Q9BXY4 272 aaPredicted RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 MMP25Q9NPA2 562 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 FRMPD3Q5JV73 1810 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 A0A1B0GUL6 1792 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TRBV25-1A0A075B6N4 114 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 NPIPB13A6NJU9 1138 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 NPIPB5A8MRT5 1133 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 SYS1-DBNDD2H3BUS1 97 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 CDKN1AP38936 164 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms