RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SPIN2BQ9BPZ2 258 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 MARVELD1Q9BSK0 173 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF436Q9C0F3 470 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-208ENST00000476739 FAM212BQ9NTI7 297 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-208ENST00000476739 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 PFDN2Q9UHV9 154 aa7.49□□□□□ -1.21
HDAC3-208ENST00000476739 C14orf166Q9Y224 244 aaKnown RBP7.49□□□□□ -1.21
HDAC3-208ENST00000476739 TRBV9A0A0B4J1U6 114 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 IGLC7A0M8Q6 106 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 BRI3O95415 125 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 TRBV12-3P01733 135 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 PRB2P02812 416 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-208ENST00000476739 CRYGCP07315 174 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 OR5AC1P0C628 307 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 UCP1P25874 307 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 PSMB6P28072 239 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 ECI1P42126 302 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 SLURP1P55000 103 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 ERVK-16P61578 105 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 DEFA6Q01524 100 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-208ENST00000476739 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-208ENST00000476739 CCDC71LQ8N9Z2 235 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 PDCD10Q9BUL8 212 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 COMMD5Q9GZQ3 224 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 NAA60Q9H7X0 242 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 NDUFA4L2Q9NRX3 87 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 SCP2D1Q9UJQ7 156 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 DMRT1Q9Y5R6 373 aa7.48□□□□□ -1.21
HDAC3-208ENST00000476739 TEX13DA0A0J9YY54 714 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-208ENST00000476739 CRYM-AS1A6NIL9 109 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 OR2J3O76001 311 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 SERPINE2P07093 398 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 P0C879 139 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 ANXA3P12429 323 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 CCR6P51684 374 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 AP3S2P59780 193 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 SUPT4H1P63272 117 aaKnown RBP7.47□□□□□ -1.21
HDAC3-208ENST00000476739 RHOGP84095 191 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 WT1-ASQ06250 92 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF616Q08AN1 781 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 TATDN3Q17R31 274 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 TRIQKQ629K1 86 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 H2BFWTQ7Z2G1 175 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 HSD17B13Q7Z5P4 300 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-208ENST00000476739 LILRB2Q8N423 598 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 GLYATL2Q8WU03 294 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 MARC2Q969Z3 335 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 C12orf57Q99622 126 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 QTRT1Q9BXR0 403 aaKnown RBP7.47□□□□□ -1.21
HDAC3-208ENST00000476739 ZNF257Q9Y2Q1 563 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 OR51B2Q9Y5P1 312 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 S4R3C0 116 aa7.47□□□□□ -1.21
HDAC3-208ENST00000476739 A0A0B4J293 547 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 C13orf42A0A1B0GVH6 325 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 FAM240BA0A1B0GVZ2 78 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 C15orf61A6NNL5 157 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 LINC01619G3V211 115 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 NDUFB8O95169 186 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 CDS2O95674 445 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 IGHV3-23P01764 117 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 FGF2P09038 288 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 H2AFB2P0C5Z0 115 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 SMIM6P0DI80 62 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 AKR1C4P17516 323 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 BTF3P20290 206 aaKnown RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 S100PP25815 95 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 HOXD3P31249 432 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 FAUP35544 74 aaKnown RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 INPP1P49441 399 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 MEOX2P50222 304 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 KPRPQ5T749 579 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 LAMTOR1Q6IAA8 161 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 Q6ZRM9 215 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 SELENOHQ8IZQ5 122 aaKnown RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 OR1L8Q8NGR8 309 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 DCUN1D4Q92564 292 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 DLX4Q92988 240 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
HDAC3-208ENST00000476739 HINT2Q9BX68 163 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 TMEM222Q9H0R3 208 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 MED28Q9H204 178 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 TMEM14BQ9NUH8 114 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 PRNDQ9UKY0 176 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.22
HDAC3-208ENST00000476739 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 OR8U8P0C7N1 319 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 BTCP35070 178 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 AKR1C2P52895 323 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 MFAP2P55001 183 aa7.45□□□□□ -1.22
HDAC3-208ENST00000476739 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms