RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CDS2O95674 445 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 MFAP2P55001 183 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 ZNF57Q68EA5 555 aaPredicted RBP9.86□□□□□ -0.83
COL5A1-206ENST00000465877 CLEC19AQ6UXS0 136 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 HAPLN4Q86UW8 402 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 GLYATL2Q8WU03 294 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 RRNAD1Q96FB5 475 aaKnown RBP9.86□□□□□ -0.83
COL5A1-206ENST00000465877 CXorf58Q96LI9 332 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 PLEKHA3Q9HB20 300 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 THYN1Q9P016 225 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
COL5A1-206ENST00000465877 SORL1Q92673 2214 aa9.86□□□□□ -0.83
COL5A1-206ENST00000465877 ST8SIA3O43173 380 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 GGCTO75223 188 aaKnown RBP9.85□□□□□ -0.83
COL5A1-206ENST00000465877 GPR183P32249 361 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 ARL3P36405 182 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 HSPE1P61604 102 aaKnown RBP9.85□□□□□ -0.83
COL5A1-206ENST00000465877 DHODHQ02127 395 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 SPINK9Q5DT21 86 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM268Q5VZI3 342 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 SLC35G3Q8N808 338 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 GALNT14Q96FL9 552 aa9.85□□□□□ -0.83
COL5A1-206ENST00000465877 TRBV7-1A0A0A6YYK4 115 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 A0A0B4J293 547 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 LY86O95711 162 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 HLA-AP01891 365 aaKnown RBP9.84□□□□□ -0.83
COL5A1-206ENST00000465877 AKR1C4P17516 323 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 INPP1P49441 399 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 SUPT4H1P63272 117 aaKnown RBP9.84□□□□□ -0.83
COL5A1-206ENST00000465877 DCTN2Q13561 401 aaKnown RBP9.84□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM187Q14656 261 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 BAK1Q16611 211 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 TATDN3Q17R31 274 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 TMED4Q7Z7H5 227 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 FAM219AQ8IW50 185 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 SELENOHQ8IZQ5 122 aaKnown RBP9.84□□□□□ -0.83
COL5A1-206ENST00000465877 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 OR1L6Q8NGR2 347 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 SDHCQ99643 169 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-206ENST00000465877 PDCD10Q9BUL8 212 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 PRR13Q9NZ81 148 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 TMEM56-RWDD3S4R434 201 aa9.84□□□□□ -0.83
COL5A1-206ENST00000465877 IFNA17P01571 189 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 ANXA3P12429 323 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 SPNP16150 400 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 HOXA1P49639 335 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-206ENST00000465877 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
COL5A1-206ENST00000465877 IL34Q6ZMJ4 242 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 VN1R17PQ8TDU5 208 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 IL22RA2Q969J5 263 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 KCNIP3Q9Y2W7 256 aa9.83□□□□□ -0.84
COL5A1-206ENST00000465877 IGHV3-21A0A0B4J1V1 117 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 A8MWP6 167 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 K7EIM0 57 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 TGOLN2O43493 480 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 CSN3P07498 182 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 IL7P13232 177 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 SRPXP78539 464 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 AARDQ4LEZ3 155 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 Q6ZRM9 215 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 SLC25A21Q9BQT8 299 aaPredicted RBP9.82□□□□□ -0.84
COL5A1-206ENST00000465877 SIGLEC8Q9NYZ4 499 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 CACNG5Q9UF02 275 aa9.82□□□□□ -0.84
COL5A1-206ENST00000465877 HUWE1Q7Z6Z7 4374 aaKnown RBP9.81□□□□□ -0.84
COL5A1-206ENST00000465877 OR2T8A6NH00 312 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 F8W735 103 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-206ENST00000465877 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 LGALS9O00182 355 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 OR2C1O95371 312 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 GP9P14770 177 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 EDN2P20800 178 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 CCR6P51684 374 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
COL5A1-206ENST00000465877 TMEM128Q5BJH2 165 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 UBAC2Q8NBM4 344 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 SCARB1Q8WTV0 552 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 MISP3Q96FF7 219 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 BSCL2Q96G97 398 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-206ENST00000465877 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
COL5A1-206ENST00000465877 A0A0B4J2A0 478 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 NAP1L6A6NFF2 107 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 CLEC3BP05452 202 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 SULT1A3P0DMM9 295 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 SULT1A4P0DMN0 295 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 VAMP1P23763 118 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 BTCP35070 178 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 SPCS3P61009 180 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 NMSQ5H8A3 153 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
COL5A1-206ENST00000465877 PLET1Q6UQ28 207 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms