RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 FAM106AQ4KMX7 169 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 CTRB2Q6GPI1 263 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 ZNF343Q6P1L6 599 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 UBAC2Q8NBM4 344 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 OR1S1Q8NH92 325 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 COQ8AQ8NI60 647 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 GLYATL2Q8WU03 294 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 DCUN1D4Q92564 292 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 GAR1Q9NY12 217 aaKnown RBP7.41□□□□□ -1.22
PKP4-208ENST00000462335 PEMTQ9UBM1 199 aa7.41□□□□□ -1.22
PKP4-208ENST00000462335 IGLC7A0M8Q6 106 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 ST8SIA3O43173 380 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 LYRM1O43325 122 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 GGCTO75223 188 aaKnown RBP7.4□□□□□ -1.22
PKP4-208ENST00000462335 NDUFB6O95139 128 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 NDUFB8O95169 186 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 IGKV1-39P01597 117 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 IGKV1-5P01602 117 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 IGHV3-23P01764 117 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 IGKV1D-39P04432 117 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
PKP4-208ENST00000462335 ARL3P36405 182 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 INSL3P51460 131 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 SPCS3P61009 180 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 UBE2MP61081 183 aaKnown RBP7.4□□□□□ -1.22
PKP4-208ENST00000462335 PRCDQ00LT1 54 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 Q56UQ5 140 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 SPINK9Q5DT21 86 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 DEFB121Q5J5C9 76 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 PLET1Q6UQ28 207 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 ETV3LQ6ZN32 361 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 REC114Q7Z4M0 266 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 ZNF429Q86V71 674 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 PINX1Q96BK5 328 aaKnown RBP7.4□□□□□ -1.22
PKP4-208ENST00000462335 GALNT14Q96FL9 552 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 F11RQ9Y624 299 aaKnown RBP7.4□□□□□ -1.22
PKP4-208ENST00000462335 TMEM56-RWDD3S4R434 201 aa7.4□□□□□ -1.22
PKP4-208ENST00000462335 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
PKP4-208ENST00000462335 TRBV9A0A0B4J1U6 114 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 A0A0B4J293 547 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 A0A0B4J2A0 478 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 CORTO00230 105 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 SFT2D2O95562 160 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 HLA-AP01891 365 aaKnown RBP7.39□□□□□ -1.23
PKP4-208ENST00000462335 CLEC3BP05452 202 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 SYNJ2BPP57105 145 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 DEFA1P59665 94 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 DEFA3P59666 94 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 WT1-ASQ06250 92 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 TMEM187Q14656 261 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 SMCO1Q147U7 214 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 UXS1Q8NBZ7 420 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 OR1P1Q8NH06 330 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 ENKURQ8TC29 256 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 DLX4Q92988 240 aaPredicted RBP7.39□□□□□ -1.23
PKP4-208ENST00000462335 GPR146Q96CH1 333 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 SHPKQ9UHJ6 478 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 S4R3C0 116 aa7.39□□□□□ -1.23
PKP4-208ENST00000462335 NOTCH3Q9UM47 2321 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 IGLV11-55A0A075B6I3 123 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 IGHV3-21A0A0B4J1V1 117 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 A0A1B0GU03 582 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 DUXBA0A1W2PPF3 345 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 DBX1A6NMT0 343 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 PPP5D1E7EU14 171 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 WRBO00258 174 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 NUPL2O15504 423 aaKnown RBP7.38□□□□□ -1.23
PKP4-208ENST00000462335 MED6O75586 246 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 NXPH3O95157 252 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 IFNA10P01566 189 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 HOXB5P09067 269 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 HTR2BP41595 481 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 MFAP4P55083 255 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 FHL3Q13643 280 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 ACSM6Q6P461 480 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 C19orf35Q6ZS72 473 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 LYZL2Q7Z4W2 148 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 DUSP18Q8NEJ0 188 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 DYNLRB2Q8TF09 96 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 TMEM230Q96A57 120 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 PALMDQ9NP74 551 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 ZC4H2Q9NQZ6 224 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 PAIP2BQ9ULR5 123 aaKnown RBP7.38□□□□□ -1.23
PKP4-208ENST00000462335 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 TMED3Q9Y3Q3 217 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 NBEAL1Q6ZS30 2694 aa7.38□□□□□ -1.23
PKP4-208ENST00000462335 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
PKP4-208ENST00000462335 TRAV6A0A075B6T7 132 aa7.37□□□□□ -1.23
PKP4-208ENST00000462335 A0A1B0GW64 132 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms