RNA–Protein interactions for RNA: ENST00000458511.6

TRAPPC2-204, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5 BASIC

Gene TRAPPC2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-204ENST00000458511 S1PR3Q99500 378 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 ZNF251Q9BRH9 671 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 SLC25A31Q9H0C2 315 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 ARV1Q9H2C2 271 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 CYTL1Q9NRR1 136 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 C19orf12Q9NSK7 152 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 LYRM2Q9NU23 88 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 CTSZQ9UBR2 303 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 DUX4Q9UBX2 424 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 PSG11Q9UQ72 335 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 RCL1Q9Y2P8 373 aaKnown RBP4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 PRELID3BQ9Y3B1 194 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 LSM5Q9Y4Y9 91 aaKnown RBP4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 DMRT1Q9Y5R6 373 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 AUP1Q9Y679 476 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 WSB1Q9Y6I7 421 aa4.34□□□□□ -1.71
TRAPPC2-204ENST00000458511 NAV2Q8IVL1 2488 aa4.34□□□□□ -1.72
TRAPPC2-204ENST00000458511 AKAP6Q13023 2319 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 BORCS7-ASMTA0A0B4J1R7 106 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 IGHV3-43A0A0B4J1X8 118 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 RPS10-NUDT3A0A1W2PQS6 291 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 C19orf84I3L1E1 186 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 FCN3O75636 299 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 IGKV1-5P01602 117 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 SOD3P08294 240 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 FAM106CPP0CH98 169 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 CD1BP29016 333 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 EFNA4P52798 201 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 AKR1C2P52895 323 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 RPL23AP62750 156 aaKnown RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 RPL30P62888 115 aaKnown RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 PDLIM3Q53GG5 364 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 DUX4L9Q6RFH8 374 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZNF841Q6ZN19 808 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZNF833PQ6ZTB9 187 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 BAP18Q8IXM2 172 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 UBAC2Q8NBM4 344 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 LY6G5BQ8NDX9 201 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 OR8B3Q8NGG8 313 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 OR52E5Q8NH55 327 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 OR4S2Q8NH73 311 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 OR9G1Q8NH87 305 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 RNASE11Q8TAA1 199 aaKnown RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 TCTEX1D2Q8WW35 142 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 OR8B2Q96RD0 313 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 PATZ1Q9HBE1 687 aaKnown RBP4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 LRRK2Q5S007 2527 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 DOPEY1Q5JWR5 2465 aa4.33□□□□□ -1.72
TRAPPC2-204ENST00000458511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■■■■■ 34.1
TRAPPC2-204ENST00000458511 USP9XQ93008 2570 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SAA2-SAA4A0A096LPE2 208 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 A0A0G2JRQ6 117 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 A0A1W2PPR1 153 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 MSGN1A6NI15 193 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 LINC01548A6NM66 108 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 CYSRT1A8MQ03 144 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 M0R1X1 148 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 CHEK1O14757 476 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SLC31A2O15432 143 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SYNGR2O43760 224 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 DFFBO76075 338 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 NDUFB8O95169 186 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 CFDP00746 253 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 HRASP01112 189 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 APOHP02749 345 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SAA2P0DJI9 122 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 IGHV1-8P0DP01 117 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 PAX1P15863 534 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 NQO2P16083 231 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 NFYBP25208 207 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 IL3RAP26951 378 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ERVK-16P61578 105 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 PJVKQ0ZLH3 352 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZNF266Q14584 549 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 LTC4SQ16873 150 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SMUG1Q53HV7 270 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 WDR25Q64LD2 544 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 H2BFWTQ7Z2G1 175 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 PUSL1Q8N0Z8 303 aaKnown RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 STPG2Q8N412 459 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 C11orf42Q8N5U0 333 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 TMEM252Q8N6L7 170 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZNF471Q9BX82 626 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 TMEM133Q9H2Q1 129 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ZC4H2Q9NQZ6 224 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 ONECUT1Q9UBC0 465 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 CACNG5Q9UF02 275 aa4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 SPTAN1Q13813 2472 aaKnown RBP4.32□□□□□ -1.72
TRAPPC2-204ENST00000458511 MED13LQ71F56 2210 aa4.31□□□□□ -1.72
TRAPPC2-204ENST00000458511 CR1P17927 2039 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms