RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 C1orf159Q96HA4 380 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 TRIB1Q96RU8 372 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 PMCHL2Q9BQD1 86 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 GGTLC3B5MD39 225 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 WNT9BO14905 357 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 GFRA3O60609 400 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 CER1O95813 267 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 CCL7P80098 99 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 EIF4EBP1Q13541 118 aaPredicted RBP13.23□□□□□ -0.29
CNOT3-204ENST00000447684 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
CNOT3-204ENST00000447684 ERVK-16P61578 105 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 C1orf185Q5T7R7 199 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 GUSBP11Q6P575 273 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-204ENST00000447684 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 OCIAD1Q9NX40 245 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 SS18L1O75177 396 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-204ENST00000447684 APOA2P02652 100 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 IMMP1LQ96LU5 166 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 CDX2Q99626 313 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-204ENST00000447684 WDR54Q9H977 334 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 HCFC1P51610 2035 aa13.22□□□□□ -0.29
CNOT3-204ENST00000447684 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 CORTO00230 105 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 GPR12P47775 334 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 UQCRFS1P47985 274 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 FOXF2Q12947 444 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 DCTN5Q9BTE1 182 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 TMEM167BQ9NRX6 74 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 DNAJC13O75165 2243 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 GAGE10A6NGK3 116 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 C2CD4DB7Z1M9 353 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 CIDEAO60543 219 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 IGLV2-8P01709 118 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 ZNF826PQ6ZT77 177 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 SSX8Q7RTT4 187 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 NUP35Q8NFH5 326 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 NAA38Q9BRA0 125 aaKnown RBP13.21□□□□□ -0.29
CNOT3-204ENST00000447684 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
CNOT3-204ENST00000447684 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.29
CNOT3-204ENST00000447684 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
CNOT3-204ENST00000447684 PPIAL4DF5H284 164 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 COX6A1P12074 109 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
CNOT3-204ENST00000447684 EDDM3AQ14507 147 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 OR1C1Q15619 314 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 VDAC2P45880 294 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-204ENST00000447684 FAM214BQ7L5A3 538 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 MOB3BQ86TA1 216 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 Q8IYB0 196 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 TCF19Q9Y242 345 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 PRSS46E5RG02 174 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 FAM71F2Q6NXP2 309 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
CNOT3-204ENST00000447684 NCKAP5O14513 1909 aa13.2□□□□□ -0.3
CNOT3-204ENST00000447684 A0A1W2PQM1 296 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 C7orf71A4D174 169 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 PPOXP50336 477 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 ALKBH6Q3KRA9 238 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 Q8TCH9 128 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 AP1S3Q96PC3 154 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 GOSR1O95249 250 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 OR13A1Q8NGR1 328 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 SNRNP40Q96DI7 357 aaKnown RBP13.19□□□□□ -0.3
CNOT3-204ENST00000447684 GNG12Q9UBI6 72 aa13.19□□□□□ -0.3
CNOT3-204ENST00000447684 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
CNOT3-204ENST00000447684 HIGD1CA8MV81 97 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 MYOD1P15172 320 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 ARR3P36575 388 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 ZNF146Q15072 292 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 RPL39P5Q59GN2 51 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 TMEM140Q9NV12 185 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 CD5LO43866 347 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 LTBRP36941 435 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 Q6ZR03 302 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 COQ2Q96H96 371 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 OR2V2Q96R30 315 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 C12orf49Q9H741 205 aa13.18□□□□□ -0.3
CNOT3-204ENST00000447684 CHTOPQ9Y3Y2 248 aaKnown RBP13.18□□□□□ -0.3
CNOT3-204ENST00000447684 DUTP33316 252 aaKnown RBP13.17□□□□□ -0.3
CNOT3-204ENST00000447684 ERVK11-1P61568 191 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 COMMD5Q9GZQ3 224 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 FAM231BA6NCW3 169 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 TCTAP57738 103 aa13.17□□□□□ -0.3
CNOT3-204ENST00000447684 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms