RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 GFRALQ6UXV0 394 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 WFDC8Q8IUA0 241 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 FAM216BQ8N7L0 139 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 ZNF439Q8NDP4 499 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
PIKFYVE-206ENST00000443896 IFNA1P01562 189 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 THBDP07204 575 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 RIPPLY3P57055 190 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 ADIPOQQ15848 244 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 TPTE2P1Q5T6R2 138 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 SPACA3Q8IXA5 215 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 CORO2AQ92828 525 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM140Q9NV12 185 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 CTXND1A0A1B0GTU2 59 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 VDAC2P45880 294 aaPredicted RBP13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 VAMP3Q15836 100 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 FFAR4Q5NUL3 377 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR10G9Q8NGN4 311 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR10G7Q8NGN6 311 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR4F5Q8NH21 305 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 OR4F4Q96R69 305 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 TMEM242Q9NWH2 141 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 IDI2-AS1Q9NZ38 188 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
PIKFYVE-206ENST00000443896 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.27
PIKFYVE-206ENST00000443896 GOSR1O95249 250 aa13.33□□□□□ -0.27
PIKFYVE-206ENST00000443896 HRASP01112 189 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 IL3RAP26951 378 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 PDLIM4P50479 330 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 CCL8P80075 99 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 BSPH1Q075Z2 132 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 TMEM30BQ3MIR4 351 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 C16orf54Q6UWD8 224 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 HCFC1P51610 2035 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 TRAV3A0A0B4J244 114 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 C17orf100A8MU93 164 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 ADMP35318 185 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 THBS3P49746 956 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 TBR1Q16650 682 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 SPATA45Q537H7 98 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 Q8N7P7 452 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 NUDT10Q8NFP7 164 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 SLC25A22Q9H936 323 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 NAT8Q9UHE5 227 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 WDR83OSQ9Y284 106 aa13.33□□□□□ -0.28
PIKFYVE-206ENST00000443896 ATMQ13315 3056 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 ACOT6Q3I5F7 207 aaPredicted RBP13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 SSX8Q7RTT4 187 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 DYSFO75923 2080 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 SPINK4O60575 86 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 SERF1AO75920 110 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 CD1BP29016 333 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 HNRNPA3P51991 378 aaKnown RBP13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 ADTRPQ96IZ2 230 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 PARLQ9H300 379 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 PLCE1Q9P212 2302 aa13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 ANKRD11Q6UB99 2663 aaPredicted RBP13.32□□□□□ -0.28
PIKFYVE-206ENST00000443896 FOXC1Q12948 553 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 CTDSP1Q9GZU7 261 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 TRGV8A0A0C4DH27 118 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 GFRA3O60609 400 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 MMP23AO75900 390 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 UBE2V1Q13404 147 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 HEYLQ9NQ87 328 aaPredicted RBP13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 LAMTOR2Q9Y2Q5 125 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 PRSS46E5RG02 174 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 BAGE3Q86Y29 109 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 BAGE2Q86Y30 109 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 SNRNP40Q96DI7 357 aaKnown RBP13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 RPUSD1Q9UJJ7 312 aaKnown RBP13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 TCF19Q9Y242 345 aa13.31□□□□□ -0.28
PIKFYVE-206ENST00000443896 CBLN1P23435 193 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 MEF2BQ02080 365 aaPredicted RBP13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 TMEM204Q9BSN7 226 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 K7ENP7 123 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 RRHO14718 337 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 C20orf144Q9BQM9 153 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 LINC00312Q9Y6C7 94 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 hADV38S2A0JD32 116 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 TMPRSS2O15393 492 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 FRMD6-AS1P0C7T7 363 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 TMEM14BQ9NUH8 114 aa13.3□□□□□ -0.28
PIKFYVE-206ENST00000443896 POU2AF1Q16633 256 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 FBLN7Q53RD9 439 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 ZCCHC24Q8N2G6 241 aaKnown RBP13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 ICE1Q9Y2F5 2266 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 MPDU1O75352 247 aa13.29□□□□□ -0.28
PIKFYVE-206ENST00000443896 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms