RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 BCL6BQ8N143 479 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-208ENST00000442054 RBMXL1Q96E39 390 aaKnown RBP6□□□□□ -1.45
CDC42BPA-208ENST00000442054 GNPNAT1Q96EK6 184 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-208ENST00000442054 C1orf159Q96HA4 380 aa6□□□□□ -1.45
CDC42BPA-208ENST00000442054 IDI2-AS1Q9NZ38 188 aa6□□□□□ -1.45
CDC42BPA-208ENST00000442054 HCFC1P51610 2035 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 ERVK-16P61578 105 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 FGFRL1Q8N441 504 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 SLC25A31Q9H0C2 315 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 TMEM133Q9H2Q1 129 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 CTSZQ9UBR2 303 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 RNF114Q9Y508 228 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 COL6A5A8TX70 2615 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 IGKV1D-17A0A075B6S4 117 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 PRSS46E5RG02 174 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 M0R1X1 148 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 IGHV4-59P01825 116 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 CTXN2P0C2S0 81 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 CEACAM6P40199 344 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 VDAC2P45880 294 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 UBE2E1P51965 193 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 OR2B8PP59922 312 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 PDLIM3Q53GG5 364 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 SOHLH1Q5JUK2 328 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 STUMQ69YW2 141 aa5.99□□□□□ -1.45
CDC42BPA-208ENST00000442054 B4DEV8 164 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 TIMM23O14925 209 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 GNMTQ14749 295 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 RPP25LQ8N5L8 163 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 CD177Q8N6Q3 437 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 TCEAL7Q9BRU2 100 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 HSPB7Q9UBY9 170 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 BCL2P10415 239 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 TMEM267Q0VDI3 215 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 MSMO1Q15800 293 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 RTL8BQ17RB0 113 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 CMTM1Q8IZ96 169 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 FRZBQ92765 325 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 TVP23CQ96ET8 276 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 SDSLQ96GA7 329 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 P2RX4Q99571 388 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 RSG1Q9BU20 258 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 WDR61Q9GZS3 305 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 A0A1B0GUS0 222 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 J3KRW8 73 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 CYB5BO43169 146 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 DEFA4P12838 97 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 NPPCP23582 126 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 SSTR5P35346 364 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 RAB7AP51149 207 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 OR2B11Q5JQS5 317 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 FAM53AQ6NSI3 398 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 ZNF695Q8IW36 515 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 RAB40CQ96S21 281 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 SPIN2AQ99865 258 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 SPIN2BQ9BPZ2 258 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 ENY2Q9NPA8 101 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 NIT2Q9NQR4 276 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 UBE2J1Q9Y385 318 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 TIMM9Q9Y5J7 89 aa5.98□□□□□ -1.45
CDC42BPA-208ENST00000442054 SEC14L6B5MCN3 397 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 PROP1O75360 226 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 S100PP25815 95 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 CATR1Q13166 79 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 ECSCRQ19T08 205 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TM4SF20Q53R12 229 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TEX36Q5VZQ5 186 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 MOB1BQ7L9L4 216 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 OR4C12Q96R67 309 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 SLC25A33Q9BSK2 321 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 KAAG1Q9UBP8 84 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TCRBV4S1A1TA0A5B7 111 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 DNAJC9-AS1A6NH13 148 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TNFSF12O43508 249 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 HBZP02008 142 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 IGHV1-8P0DP01 117 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 RPL30P62888 115 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 ACSM6Q6P461 480 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 RNASEH2CQ8TDP1 164 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TCTEX1D2Q8WW35 142 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 TMEM68Q96MH6 324 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 PUS1Q9Y606 427 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 DYSFO75923 2080 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 VWC2LB2RUY7 222 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 M0R036 132 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 HIST1H1BP16401 226 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 SERF2P84101 59 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 ANAPC16Q96DE5 110 aa5.97□□□□□ -1.45
CDC42BPA-208ENST00000442054 CENPVL3A0A0U1RRI6 287 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 KBTBD11-OT1A0A1B0GTJ5 212 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 FAM90A26D6RGX4 464 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 RAMP3O60896 148 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 TRGC2P03986 189 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 GPX4P36969 197 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 DRAM1Q8N682 238 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 OR13A1Q8NGR1 328 aa5.96□□□□□ -1.45
CDC42BPA-208ENST00000442054 SYNGR2O43760 224 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 PSPNO60542 156 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 TRGC1P0CF51 173 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms