RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FKBP11Q9NYL4 201 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 IGHV4-30-2A0A087WSY4 118 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 PRSS46E5RG02 174 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 SCAF4O95104 1147 aaKnown RBP16.97■□□□□ 0.31
PTPRF-207ENST00000436724 LY86O95711 162 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 IFNA4P05014 189 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 FBP1P09467 338 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 CD24P25063 80 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 LGALS7P47929 136 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 ATP6V1FQ16864 119 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 VMA21Q3ZAQ7 101 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 VSIRQ9H7M9 311 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 PTPN13Q12923 2485 aa16.97■□□□□ 0.31
PTPRF-207ENST00000436724 TOX4O94842 621 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 NPY1RP25929 384 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 SNRPEP62304 92 aaKnown RBP16.96■□□□□ 0.31
PTPRF-207ENST00000436724 ZNF506Q5JVG8 444 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 CLEC2AQ6UVW9 174 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 FAM24BQ8N5W8 94 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 NDUFA4L2Q9NRX3 87 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 NAV3Q8IVL0 2385 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 CGB1A6NKQ9 187 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 RAB5AP20339 215 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 SSX2Q16385 188 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 DYNAPQ8N1N2 210 aa16.96■□□□□ 0.31
PTPRF-207ENST00000436724 PCP4L1A6NKN8 68 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 VWC2LB2RUY7 222 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 FGF7P21781 194 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 VWC2Q2TAL6 325 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 OR4A5Q8NH83 315 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 YPEL4Q96NS1 127 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 TBX15Q96SF7 602 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 PARD6GQ9BYG4 376 aaPredicted RBP16.95■□□□□ 0.3
PTPRF-207ENST00000436724 ANKRD17O75179 2603 aaKnown RBP16.95■□□□□ 0.3
PTPRF-207ENST00000436724 TRAV1-1A0A0B4J248 108 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 H3BQ15 152 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 FOXH1O75593 365 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 PSG5Q15238 335 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 FBLN7Q53RD9 439 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 IQCF2Q8IXL9 164 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 OR1L8Q8NGR8 309 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 ABCA12Q86UK0 2595 aa16.95■□□□□ 0.3
PTPRF-207ENST00000436724 ZFHX3Q15911 3703 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 SMCO3A2RU48 225 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 C5orf52A6NGY3 159 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 VENTXO95231 258 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 HBE1P02100 147 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 HSPB1P04792 205 aaKnown RBP16.94■□□□□ 0.3
PTPRF-207ENST00000436724 CD1BP29016 333 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 MAS1LP35410 378 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 CEACAM3P40198 252 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 ELLP55199 621 aaPredicted RBP16.94■□□□□ 0.3
PTPRF-207ENST00000436724 RAB11AP62491 216 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 CFHR4Q92496 578 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 C12orf57Q99622 126 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 RPRMQ9NS64 109 aa16.94■□□□□ 0.3
PTPRF-207ENST00000436724 PSMG3Q9BT73 122 aaPredicted RBP16.94■□□□□ 0.3
PTPRF-207ENST00000436724 KRTAP10-9P60411 292 aa16.93■□□□□ 0.3
PTPRF-207ENST00000436724 ZNF787Q6DD87 383 aa16.93■□□□□ 0.3
PTPRF-207ENST00000436724 CYB561D1Q8N8Q1 229 aa16.93■□□□□ 0.3
PTPRF-207ENST00000436724 FBXL15Q9H469 300 aa16.93■□□□□ 0.3
PTPRF-207ENST00000436724 METTL1Q9UBP6 276 aaKnown RBP16.93■□□□□ 0.3
PTPRF-207ENST00000436724 SIGLEC9Q9Y336 463 aa16.93■□□□□ 0.3
PTPRF-207ENST00000436724 NDUFS8O00217 210 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 CRYGBP07316 175 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 MDKP21741 143 aaPredicted RBP16.92■□□□□ 0.3
PTPRF-207ENST00000436724 TEX45Q8NA69 505 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 MALSU1Q96EH3 234 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 NPCDR1Q9BY65 106 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 EIF3GO75821 320 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTPRF-207ENST00000436724 OR2C1O95371 312 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 IGKV1D-33P01593 117 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 IGKV1-33P01594 117 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 CEBPGP53567 150 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 RAB2AP61019 212 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 WT1-ASQ06250 92 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 ZNF726P1Q15940 193 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 KHDC3LQ587J8 217 aa16.92■□□□□ 0.3
PTPRF-207ENST00000436724 LOC102723971A0A1B0GUV8 181 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 ZNF727A8MUV8 499 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 LGALS4P56470 323 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 PRSS8Q16651 343 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 ARSJQ5FYB0 599 aaPredicted RBP16.91■□□□□ 0.3
PTPRF-207ENST00000436724 TREML4Q6UXN2 200 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 APELAP0DMC3 54 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 RNASE2P10153 161 aaKnown RBP16.91■□□□□ 0.3
PTPRF-207ENST00000436724 TNXAQ16473 311 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 ACSM6Q6P461 480 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 PPP1R27Q86WC6 154 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 MBD3L1Q8WWY6 194 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 WDR83OSQ9Y284 106 aa16.91■□□□□ 0.3
PTPRF-207ENST00000436724 FCN1O00602 326 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 MEOX2P50222 304 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 GNB1P62873 340 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 SERF2P84101 59 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 BSXQ3C1V8 233 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 SSX7Q7RTT5 188 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 NBPF19A0A087WUL8 3843 aa16.9■□□□□ 0.3
PTPRF-207ENST00000436724 REG1AP05451 166 aa16.89■□□□□ 0.3
PTPRF-207ENST00000436724 MMDQ15546 238 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms