RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 AKR1C2P52895 323 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 TMBIM6P55061 237 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 PIGPP57054 158 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 IL18Q14116 193 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 CD300EQ496F6 205 aaPredicted RBP9.62□□□□□ -0.87
SGCE-203ENST00000425444 STEAP1BQ6NZ63 245 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 GPHB5Q86YW7 130 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 CADM3Q8N126 398 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 Q8N1Y9 231 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 DIRAS2Q96HU8 199 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 TUBA4BQ9H853 241 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 COPZ2Q9P299 210 aa9.62□□□□□ -0.87
SGCE-203ENST00000425444 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 IGKV1-39P01597 117 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 IGKV1D-39P04432 117 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 PTBP1P26599 531 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■□□ 14.7
SGCE-203ENST00000425444 RPL5P46777 297 aaKnown RBP9.61□□□□□ -0.87
SGCE-203ENST00000425444 CD81P60033 236 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 RND3P61587 244 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 MEF2DQ14814 521 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 GUCA2BQ16661 112 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 TRIM16LQ309B1 348 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 PLET1Q6UQ28 207 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 CCDC71LQ8N9Z2 235 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 UBAC2Q8NBM4 344 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 OR4D10Q8NGI6 311 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 OR1L6Q8NGR2 347 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 ZFAND1Q8TCF1 268 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 VN1R17PQ8TDU5 208 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 CACNG8Q8WXS5 425 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 SEC22AQ96IW7 307 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 TMEM14BQ9NUH8 114 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 SLC2A8Q9NY64 477 aa9.61□□□□□ -0.87
SGCE-203ENST00000425444 IGHV3-35A0A0C4DH35 117 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 C3orf85A0A1B0GTC6 90 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 DISC1C4P0D8 188 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 TGOLN2O43493 480 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 ATG12O94817 140 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 CD74P04233 296 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 SSBP1Q04837 148 aaKnown RBP9.6□□□□□ -0.87
SGCE-203ENST00000425444 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 FAAP20Q6NZ36 180 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 OR13C8Q8NGS7 320 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 TERB2Q8NHR7 220 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 RNASE11Q8TAA1 199 aaKnown RBP9.6□□□□□ -0.87
SGCE-203ENST00000425444 MARCH1Q8TCQ1 289 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 SMIM4Q8WVI0 70 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 TP53RKQ96S44 253 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 TECRQ9NZ01 308 aaKnown RBP9.6□□□□□ -0.87
SGCE-203ENST00000425444 RABL2AQ9UBK7 228 aaPredicted RBP9.6□□□□□ -0.87
SGCE-203ENST00000425444 RABL2BQ9UNT1 228 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 ABCA13Q86UQ4 5058 aa9.6□□□□□ -0.87
SGCE-203ENST00000425444 TMEM213A2RRL7 107 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 A8MWP6 167 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 H3BMQ9 156 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 CBLN1P23435 193 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 MFAP2P55001 183 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 Q56UQ5 140 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 WDR89Q96FK6 387 aaPredicted RBP9.59□□□□□ -0.87
SGCE-203ENST00000425444 BSCL2Q96G97 398 aaPredicted RBP9.59□□□□□ -0.87
SGCE-203ENST00000425444 NEURL2Q9BR09 285 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 THAP7Q9BT49 309 aaPredicted RBP9.59□□□□□ -0.87
SGCE-203ENST00000425444 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 PLEKHA3Q9HB20 300 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 C19orf73Q9NVV2 129 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 C14orf166Q9Y224 244 aaKnown RBP9.59□□□□□ -0.87
SGCE-203ENST00000425444 UFC1Q9Y3C8 167 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 SELENOKQ9Y6D0 94 aa9.59□□□□□ -0.87
SGCE-203ENST00000425444 PKHD1P08F94 4074 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 A8MZ25 164 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 CTDSPLO15194 276 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 CTSDP07339 412 aaPredicted RBP9.58□□□□□ -0.88
SGCE-203ENST00000425444 AKAIN1P0CW23 69 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
SGCE-203ENST00000425444 IZUMO4Q1ZYL8 232 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 SP6Q3SY56 376 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 TM4SF20Q53R12 229 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 SPINK9Q5DT21 86 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 ZNF57Q68EA5 555 aaPredicted RBP9.58□□□□□ -0.88
SGCE-203ENST00000425444 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 UXS1Q8NBZ7 420 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 OR1P1Q8NH06 330 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 MCFD2Q8NI22 146 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 SCARB1Q8WTV0 552 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 RRNAD1Q96FB5 475 aaKnown RBP9.58□□□□□ -0.88
SGCE-203ENST00000425444 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
SGCE-203ENST00000425444 K7EIM0 57 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 LY6G6CO95867 125 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 IFNA17P01571 189 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms