RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CD3EP07766 207 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 LOXP28300 417 aaPredicted RBP9.41□□□□□ -0.9
UBR4-207ENST00000425413 RITA1Q96K30 269 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 SVEP1Q4LDE5 3571 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 REG1AP05451 166 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
UBR4-207ENST00000425413 OPRK1P41145 380 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
UBR4-207ENST00000425413 A0A0U1RQK1 487 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 H0YJW9 148 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 H7BYZ3 331 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 GNB1P62873 340 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 OR9G1Q8NH87 305 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 IGFBPL1Q8WX77 278 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 FLYWCH2Q96CP2 140 aaKnown RBP9.4□□□□□ -0.9
UBR4-207ENST00000425413 VKORC1Q9BQB6 163 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 ARHGAP32A7KAX9 2087 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 A0A1W2PPQ1 181 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 SEC14L6B5MCN3 397 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 EFNB3Q15768 340 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 FAM78BQ5VT40 261 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 ZNF114Q8NC26 417 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 OR10A7Q8NGE5 316 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 PFDN5Q99471 154 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.9
UBR4-207ENST00000425413 IGKV1OR2-108A0A075B7D4 117 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 SLC25A17O43808 307 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 OR10J1P30954 320 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 MEF2CQ06413 473 aaPredicted RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 ZNF833PQ6ZTB9 187 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 SIAH2O43255 324 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 MPDU1O75352 247 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 COX7A1P24310 79 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 CASP6P55212 293 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 LY86O95711 162 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 IGHV2-70P01814 119 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 GALR1P47211 349 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 RND2P52198 227 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 TMPRSS3P57727 454 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
UBR4-207ENST00000425413 RAB31Q13636 194 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 MUC15Q8N387 334 aa9.39□□□□□ -0.91
UBR4-207ENST00000425413 WNK2Q9Y3S1 2297 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 TGIF2LXQ8IUE1 241 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 NABP2Q9BQ15 211 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 PCGF1Q9BSM1 259 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
UBR4-207ENST00000425413 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 OR10J4P0C629 311 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 LGALS4P56470 323 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
UBR4-207ENST00000425413 GAMTQ14353 236 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
UBR4-207ENST00000425413 CNTFRP26992 372 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 GCHFRP30047 84 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
UBR4-207ENST00000425413 TMEM242Q9NWH2 141 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 CXorf1O96002 111 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
UBR4-207ENST00000425413 RHOBP62745 196 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 HCP5Q6MZN7 132 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 TMEM37Q8WXS4 190 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
UBR4-207ENST00000425413 TRBV20OR9-2A0A075B6H5 130 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 PPP5D1E7EU14 171 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 OR7C2O60412 319 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 PMS2P11Q13670 270 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 PSG5Q15238 335 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
UBR4-207ENST00000425413 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 TRBV24-1A0A075B6N3 115 aa9.36□□□□□ -0.91
UBR4-207ENST00000425413 A0A1W2PRD5 423 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms