RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 OR13C7P0DN81 318 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 FHITP49789 147 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
CALD1-204ENST00000417172 C5orf64Q2M2E5 130 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 TMEM182Q6ZP80 229 aaPredicted RBP13.51□□□□□ -0.25
CALD1-204ENST00000417172 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
CALD1-204ENST00000417172 MDFIC2A0A1B0GVS7 189 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 IFNA5P01569 189 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 FAM106CPP0CH98 169 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 BSXQ3C1V8 233 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 TMEM219Q86XT9 240 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
CALD1-204ENST00000417172 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 PINX1Q96BK5 328 aaKnown RBP13.51□□□□□ -0.25
CALD1-204ENST00000417172 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 TLN2Q9Y4G6 2542 aa13.51□□□□□ -0.25
CALD1-204ENST00000417172 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
CALD1-204ENST00000417172 BRS3P32247 399 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 SNCAP37840 140 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 MLANAQ16655 118 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 LRRC75BQ2VPJ9 315 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 OR2G3Q8NGZ4 309 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 WDR61Q9GZS3 305 aaKnown RBP13.5□□□□□ -0.25
CALD1-204ENST00000417172 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
CALD1-204ENST00000417172 A0A1W2PN81 502 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 ZNF705EA8MWA4 302 aaPredicted RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 CNIH1O95406 144 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 LY86O95711 162 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 SEC11BP0C7V7 166 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 CHRNA7P36544 502 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 RAB11AP62491 216 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 NDPQ00604 133 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 BCL6BQ8N143 479 aaPredicted RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 Q8N9W7 124 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 PIFOQ8TCI5 191 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 SSMEM1Q8WWF3 244 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 P2RX4Q99571 388 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 FBXO7Q9Y3I1 522 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 SH2D7A6NKC9 451 aaPredicted RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 FGF16O43320 207 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 MAS1LP35410 378 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 SULT1A2P50226 295 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 VWC2Q2TAL6 325 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 C2orf83Q53S99 150 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 EIF5AL1Q6IS14 154 aaKnown RBP13.49□□□□□ -0.25
CALD1-204ENST00000417172 SCGB1C1Q8TD33 95 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
CALD1-204ENST00000417172 MXRA5Q9NR99 2828 aa13.48□□□□□ -0.25
CALD1-204ENST00000417172 LINC00862A6NCI5 91 aa13.48□□□□□ -0.25
CALD1-204ENST00000417172 FGF7P21781 194 aa13.48□□□□□ -0.25
CALD1-204ENST00000417172 TAF15Q92804 592 aaKnown RBP eCLIP13.48□□□□□ -0.25
CALD1-204ENST00000417172 SSX3Q99909 188 aa13.48□□□□□ -0.25
CALD1-204ENST00000417172 FAM96BQ9Y3D0 163 aa13.48□□□□□ -0.25
CALD1-204ENST00000417172 INS-IGF2F8WCM5 200 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 MFAP2P55001 183 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 FXYD3Q14802 87 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 ATP6V1FQ16864 119 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 J3QLI3 93 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 CTRB1P17538 263 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 CX3CL1P78423 397 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 HSPB9Q9BQS6 159 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 MEGF9Q9H1U4 602 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
CALD1-204ENST00000417172 MDKP21741 143 aaPredicted RBP13.46□□□□□ -0.25
CALD1-204ENST00000417172 LY6EQ16553 131 aa13.46□□□□□ -0.25
CALD1-204ENST00000417172 TREML4Q6UXN2 200 aa13.46□□□□□ -0.25
CALD1-204ENST00000417172 ABHD5Q8WTS1 349 aa13.46□□□□□ -0.25
CALD1-204ENST00000417172 GNPNAT1Q96EK6 184 aaPredicted RBP13.46□□□□□ -0.25
CALD1-204ENST00000417172 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.25
CALD1-204ENST00000417172 ACANP16112 2415 aa13.46□□□□□ -0.26
CALD1-204ENST00000417172 H3BUX3 64 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 ELLP55199 621 aaPredicted RBP13.45□□□□□ -0.26
CALD1-204ENST00000417172 DLK1P80370 383 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 BTNL8Q6UX41 500 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 Q6ZRG5 221 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
CALD1-204ENST00000417172 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 PRH1P02810 166 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 FBP1P09467 338 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 PXDC1Q5TGL8 231 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 CYB5R2Q6BCY4 276 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 FAM213BQ8TBF2 198 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 FOXC2Q99958 501 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 NPCDR1Q9BY65 106 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 PARD6GQ9BYG4 376 aaPredicted RBP13.45□□□□□ -0.26
CALD1-204ENST00000417172 WDR83OSQ9Y284 106 aa13.45□□□□□ -0.26
CALD1-204ENST00000417172 MYO9AB2RTY4 2548 aa13.44□□□□□ -0.26
CALD1-204ENST00000417172 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
CALD1-204ENST00000417172 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
CALD1-204ENST00000417172 ASPHD1Q5U4P2 390 aa13.44□□□□□ -0.26
CALD1-204ENST00000417172 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms