RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PRR33A8MZF0 331 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 TMEM50AO95807 157 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 UCP1P25874 307 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 LHX2P50458 406 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 TMPRSS3P57727 454 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 SMAGPQ0VAQ4 97 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 C5orf24Q7Z6I8 188 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 SIGLEC12Q96PQ1 595 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 CHODLQ9H9P2 273 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
UBR4-205ENST00000417040 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 NAPSAO96009 420 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 MRPL20Q9BYC9 149 aaKnown RBP10.13□□□□□ -0.79
UBR4-205ENST00000417040 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 FGF16O43320 207 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 BEND2Q8NDZ0 799 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 WFDC12Q8WWY7 111 aa10.13□□□□□ -0.79
UBR4-205ENST00000417040 FOXH1O75593 365 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
UBR4-205ENST00000417040 FAM216BQ8N7L0 139 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 COL4A5P29400 1685 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 OR9G1Q8NH87 305 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 MBD3L1Q8WWY6 194 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 HGFACQ04756 655 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 SAPCD1Q5SSQ6 148 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 SPTBP11277 2137 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 NPC2P61916 151 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 BMPERQ8N8U9 685 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 CLEC7AQ9BXN2 247 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 STRCP1A6NGW2 1772 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 LOC105371242A0A075B767 164 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 LOC390937A0A1W2PQ73 354 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
UBR4-205ENST00000417040 CD69Q07108 199 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 EEF1AKMT3Q96AZ1 226 aa10.12□□□□□ -0.79
UBR4-205ENST00000417040 CKS1BP61024 79 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 TMEM186Q96B77 213 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 SFXN3Q9BWM7 321 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 RBBP6Q7Z6E9 1792 aaKnown RBP10.11□□□□□ -0.79
UBR4-205ENST00000417040 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 PAQR4Q8N4S7 273 aaPredicted RBP10.11□□□□□ -0.79
UBR4-205ENST00000417040 NEUROG1Q92886 237 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 A0A1W2PQM1 296 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 J3QRE1 110 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 LINC00114Q6XXX2 140 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 CYTL1Q9NRR1 136 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 CEACAM4O75871 244 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 FOXL1Q12952 345 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 MTCL1Q9Y4B5 1905 aaKnown RBP10.11□□□□□ -0.79
UBR4-205ENST00000417040 IGHV1-69-2A0A0G2JMI3 117 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 CACNG7P62955 275 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 IGLV3-21P80748 117 aaPredicted RBP10.11□□□□□ -0.79
UBR4-205ENST00000417040 C5orf30Q96GV9 206 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 COQ2Q96H96 371 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
UBR4-205ENST00000417040 CHCHD2Q9Y6H1 151 aaPredicted RBP10.11□□□□□ -0.79
UBR4-205ENST00000417040 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 EPOPA6NHQ4 379 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 NPIPB4C9JG80 1138 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 CTSSP25774 331 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 ASIPP42127 132 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 SPATA31B1PQ5VZV4 182 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 LINC01560Q8TB33 94 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 TIMP4Q99727 224 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
UBR4-205ENST00000417040 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
UBR4-205ENST00000417040 POLR2AP24928 1970 aaKnown RBP10.1□□□□□ -0.79
UBR4-205ENST00000417040 IGKV1-9A0A0C4DH69 117 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 CA7P43166 264 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
UBR4-205ENST00000417040 SIGMAR1Q99720 223 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 VKORC1Q9BQB6 163 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 TSPOP30536 169 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 ORMDL3Q8N138 153 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 ZNF319Q9P2F9 582 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 TAF1LQ8IZX4 1826 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 CD24P25063 80 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 GDF15Q99988 308 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
UBR4-205ENST00000417040 TMEM256Q8N2U0 113 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 NYNRINQ9P2P1 1898 aaKnown RBP10.09□□□□□ -0.79
UBR4-205ENST00000417040 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 CD33P20138 364 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 CD5P06127 495 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms