RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ACSM6Q6P461 480 aa19.42■□□□□ 0.7
CPNE1-207ENST00000414664 TMEM230Q96A57 120 aa19.42■□□□□ 0.7
CPNE1-207ENST00000414664 F11RQ9Y624 299 aaKnown RBP19.42■□□□□ 0.7
CPNE1-207ENST00000414664 TRBV7-1A0A0A6YYK4 115 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 IZUMO4Q1ZYL8 232 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 TMEM268Q5VZI3 342 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 LINC00299Q6ZSB3 139 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 SELENOHQ8IZQ5 122 aaKnown RBP19.41■□□□□ 0.7
CPNE1-207ENST00000414664 IL22RA2Q969J5 263 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 OR4C12Q96R67 309 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 TMEM56-RWDD3S4R434 201 aa19.41■□□□□ 0.7
CPNE1-207ENST00000414664 A0A0B4J293 547 aa19.4■□□□□ 0.7
CPNE1-207ENST00000414664 PIGBOS1A0A0B4J2F0 54 aa19.4■□□□□ 0.7
CPNE1-207ENST00000414664 CENPXA8MT69 81 aa19.4■□□□□ 0.7
CPNE1-207ENST00000414664 ERHP84090 104 aaKnown RBP19.4■□□□□ 0.7
CPNE1-207ENST00000414664 TMED4Q7Z7H5 227 aa19.4■□□□□ 0.7
CPNE1-207ENST00000414664 SDHCQ99643 169 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-207ENST00000414664 PLEKHA3Q9HB20 300 aa19.4■□□□□ 0.7
CPNE1-207ENST00000414664 BMPR1BO00238 502 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 IFNA17P01571 189 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 SYNJ2BPP57105 145 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 SRPXP78539 464 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 TMEM187Q14656 261 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 OR2C3Q8N628 320 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 SLC35G3Q8N808 338 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 LHFPL5Q8TAF8 219 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 VN1R17PQ8TDU5 208 aa19.39■□□□□ 0.69
CPNE1-207ENST00000414664 ST8SIA3O43173 380 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 GGCTO75223 188 aaKnown RBP19.38■□□□□ 0.69
CPNE1-207ENST00000414664 RBMS2Q15434 407 aaKnown RBP19.38■□□□□ 0.69
CPNE1-207ENST00000414664 TMEM128Q5BJH2 165 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 CLEC19AQ6UXS0 136 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 OR9G4Q8NGQ1 327 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 OR1P1Q8NH06 330 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 MRAPQ8TCY5 172 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 C7orf50Q9BRJ6 194 aaKnown RBP19.38■□□□□ 0.69
CPNE1-207ENST00000414664 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-207ENST00000414664 DMRT1Q9Y5R6 373 aa19.38■□□□□ 0.69
CPNE1-207ENST00000414664 IGHV3-23P01764 117 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 IL7P13232 177 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 ARL3P36405 182 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 CNPY1Q3B7I2 92 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 CCDC140Q96MF4 163 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 PEMTQ9UBM1 199 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 S4R3C0 116 aa19.37■□□□□ 0.69
CPNE1-207ENST00000414664 A0A0G2JRQ6 117 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 MFSD2BA6NFX1 497 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 SUPT4H1P63272 117 aaKnown RBP19.36■□□□□ 0.69
CPNE1-207ENST00000414664 LGI3Q8N145 548 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 ZNF114Q8NC26 417 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 ENY2Q9NPA8 101 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 CACFD1Q9UGQ2 172 aa19.36■□□□□ 0.69
CPNE1-207ENST00000414664 PPP5D1E7EU14 171 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 INS-IGF2F8WCM5 200 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 CLEC3BP05452 202 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 SNCAP37840 140 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 Q6ZRM9 215 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 CENPSQ8N2Z9 138 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 ZNF502Q8TBZ5 544 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 GPR146Q96CH1 333 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 BATF3Q9NR55 127 aa19.35■□□□□ 0.69
CPNE1-207ENST00000414664 A0A0B4J2A0 478 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 LINC00854A0A1B0GVQ3 168 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 CCR6P51684 374 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 MFAP2P55001 183 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 SPCS3P61009 180 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 AARDQ4LEZ3 155 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 SPINK9Q5DT21 86 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 OR52E5Q8NH55 327 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 S100ZQ8WXG8 99 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 ATP6V0BQ99437 205 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 CACNG5Q9UF02 275 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 SHPKQ9UHJ6 478 aa19.34■□□□□ 0.69
CPNE1-207ENST00000414664 WI2-2373I1.2A0A1W2PRP0 233 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 NDUFB6O95139 128 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 OR2C1O95371 312 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 VAMP1P23763 118 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 HOXA1P49639 335 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-207ENST00000414664 SUB1P53999 127 aaKnown RBP eCLIP19.33■□□□□ 0.68
CPNE1-207ENST00000414664 GPHB5Q86YW7 130 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 PRR13Q9NZ81 148 aa19.33■□□□□ 0.68
CPNE1-207ENST00000414664 ZNF256Q9Y2P7 627 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-207ENST00000414664 K7EIL1 84 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 UBE2MP61081 183 aaKnown RBP19.32■□□□□ 0.68
CPNE1-207ENST00000414664 DCTN2Q13561 401 aaKnown RBP19.32■□□□□ 0.68
CPNE1-207ENST00000414664 FAM106AQ4KMX7 169 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 SCARB1Q8WTV0 552 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 CCDC32Q9BV29 185 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 C21orf62Q9NYP8 219 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 SIGLEC8Q9NYZ4 499 aa19.32■□□□□ 0.68
CPNE1-207ENST00000414664 DUXBA0A1W2PPF3 345 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 HLA-AP01891 365 aaKnown RBP19.31■□□□□ 0.68
CPNE1-207ENST00000414664 SULT1A3P0DMM9 295 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 SULT1A4P0DMN0 295 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 GPR183P32249 361 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 PLET1Q6UQ28 207 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 MISP3Q96FF7 219 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 GAR1Q9NY12 217 aaKnown RBP19.31■□□□□ 0.68
CPNE1-207ENST00000414664 PTTG2Q9NZH5 202 aa19.31■□□□□ 0.68
CPNE1-207ENST00000414664 K7EIM0 57 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms