RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 DMBX1Q8NFW5 382 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 OR10C1Q96KK4 312 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 ATG5Q9H1Y0 275 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
CHMP3-203ENST00000409225 ZNF705EA8MWA4 302 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-203ENST00000409225 DFFBO76075 338 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 HPRT1P00492 218 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 IFNA10P01566 189 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 C4BPBP20851 252 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 FABP5Q01469 135 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 POU2AF1Q16633 256 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 HSD17B13Q7Z5P4 300 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-203ENST00000409225 UBE2DNLQ8IWF7 75 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 NUDCD2Q8WVJ2 157 aa12.02□□□□□ -0.49
CHMP3-203ENST00000409225 DGCR14Q96DF8 476 aaKnown RBP12.02□□□□□ -0.49
CHMP3-203ENST00000409225 ST8SIA3O43173 380 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHMP3-203ENST00000409225 EIF4EP06730 217 aaKnown RBP12.01□□□□□ -0.49
CHMP3-203ENST00000409225 PSMA1P25786 263 aaKnown RBP12.01□□□□□ -0.49
CHMP3-203ENST00000409225 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CHMP3-203ENST00000409225 ARL6IP1Q15041 203 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 SOHLH1Q5JUK2 328 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 HACD4Q5VWC8 232 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 Q6ZR54 194 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 TRPT1Q86TN4 253 aaKnown RBP12.01□□□□□ -0.49
CHMP3-203ENST00000409225 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 OR1L8Q8NGR8 309 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 DCSTAMPQ9H295 470 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 CLEC5AQ9NY25 188 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 ANXA10Q9UJ72 324 aa12.01□□□□□ -0.49
CHMP3-203ENST00000409225 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 IFITM5A6NNB3 132 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 ZNF773Q6PK81 442 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 PACRGLQ8N7B6 248 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 LSM10Q969L4 123 aaKnown RBP12□□□□□ -0.49
CHMP3-203ENST00000409225 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 RABAC1Q9UI14 185 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 TBC1D24Q9ULP9 559 aa12□□□□□ -0.49
CHMP3-203ENST00000409225 TMEM235A6NFC5 223 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 C16orf90A8MZG2 172 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 PDCD5O14737 125 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 CDK2AP2O75956 126 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 IFNA21P01568 189 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 IFNA17P01571 189 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 APOHP02749 345 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-203ENST00000409225 CD5P06127 495 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 FGF2P09038 288 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 SPP1P10451 314 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 CATR1Q13166 79 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-203ENST00000409225 Q6ZRM9 215 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 OR51H1Q8NH63 302 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 AGRNO00468 2067 aa11.99□□□□□ -0.49
CHMP3-203ENST00000409225 KNCNA6PVL3 124 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 PTHLHP12272 177 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 FCGR2CP31995 323 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 GNG2P59768 71 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 MSMO1Q15800 293 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 C1orf134Q5TEV5 83 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 ZBTB34Q8NCN2 500 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 SLC25A46Q96AG3 418 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 NXF2Q9GZY0 626 aaKnown RBP11.98□□□□□ -0.49
CHMP3-203ENST00000409225 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 TMEM14BQ9NUH8 114 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 NSG2Q9Y328 171 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 OR51B2Q9Y5P1 312 aa11.98□□□□□ -0.49
CHMP3-203ENST00000409225 TRAV2A0A0B4J234 112 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 SSX5O60225 188 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 CD74P04233 296 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 MFAP4P55083 255 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 ARPC4P59998 168 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 UBE2UQ5VVX9 321 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 PLEKHA2Q9HB19 425 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 ACOT13Q9NPJ3 140 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 COMMD9Q9P000 198 aa11.97□□□□□ -0.49
CHMP3-203ENST00000409225 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
CHMP3-203ENST00000409225 PPYP01298 95 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 NPY1RP25929 384 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 FXYD4P59646 89 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 ERVK-16P61578 105 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 MLLT11Q13015 90 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-203ENST00000409225 AADACL3Q5VUY0 350 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 CSNK1G2-AS1Q8NCQ2 148 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
CHMP3-203ENST00000409225 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 I3L2K1 104 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 RAB3BP20337 219 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 ZNF818PQ6ZRF7 136 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 STXBP6Q8NFX7 210 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms