RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RCVRNP35243 200 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 KIR2DS4P43632 304 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 APOC4P55056 127 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 ATP5J2P56134 94 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 TAS2R19P59542 299 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEFA1P59665 94 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEFA3P59666 94 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 MEF2CQ06413 473 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 KIR2DS1Q14954 304 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZMYND11Q15326 602 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 ACTBL2Q562R1 376 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 VAX1Q5SQQ9 334 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM201AQ5SY85 155 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 TRIQKQ629K1 86 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 C16orf87Q6PH81 154 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 SPICQ8N5J4 248 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM229BQ8NBD8 167 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 C19orf18Q8NEA5 215 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEFB108BQ8NET1 73 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 MRPL30Q8TCC3 161 aaKnown RBP3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 NEK7Q8TDX7 302 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 RPUSD4Q96CM3 377 aaKnown RBP3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 GAFA1Q96PS6 74 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM246Q9BRR3 403 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 PPA2Q9H2U2 334 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 NARFLQ9H6Q4 476 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 PATZ1Q9HBE1 687 aaKnown RBP3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 DCAF16Q9NXF7 216 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 PIPOXQ9P0Z9 390 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 AK3Q9UIJ7 227 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 CACNG2Q9Y698 323 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 UNC79Q9P2D8 2635 aa3.35□□□□□ -1.87
HMGB3P19-201ENST00000403971 CCDC168Q8NDH2 2452 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ODAMA1E959 279 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 NAP1L6A6NFF2 107 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CENPXA8MT69 81 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CEACAM18A8MTB9 384 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF736B4DX44 427 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 LYNX1G3V0Z9 82 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 H0Y9J4 135 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 NDUFB3O43676 98 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 GYPAP02724 150 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CD74P04233 296 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 AKAIN1P0CW23 69 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CGB3P0DN86 165 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CGB7P0DN87 165 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 LYNX1P0DP58 116 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 PTHLHP12272 177 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 SLC25A16P16260 332 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 GZMHP20718 246 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CD1BP29016 333 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAUP35544 74 aaKnown RBP3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 GABRA2P47869 451 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 INPP1P49441 399 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CEBPDP49716 269 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 TAS2R46P59540 309 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 IFITM3Q01628 133 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 GRK1Q15835 563 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 DEFB113Q30KQ7 82 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 LRRC10Q5BKY1 277 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 C6orf183Q5T699 404 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CLEC2AQ6UVW9 174 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 GDPD3Q7L5L3 318 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 TRAPPC6BQ86SZ2 158 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 TOMM5Q8N4H5 51 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ARRDC1Q8N5I2 433 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF565Q8N9K5 539 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ASCC1Q8N9N2 400 aaKnown RBP3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR4S1Q8NGB4 309 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR8B3Q8NGG8 313 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR4A4PQ8NGN8 299 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR4K15Q8NH41 348 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 PLPPR1Q8TBJ4 325 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 C10orf105Q8TEF2 133 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 COQ2Q96H96 371 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR8B2Q96RD0 313 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 CCL13Q99616 98 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 TOLLIPQ9H0E2 274 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 LINC00574Q9H8X3 128 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF286AQ9HBT8 521 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 IFT46Q9NQC8 304 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 NUDT15Q9NV35 164 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 SLC2A8Q9NY64 477 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 COPZ2Q9P299 210 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 KIF25Q9UIL4 384 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 ANXA10Q9UJ72 324 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 LINC00312Q9Y6C7 94 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 FBN2P35556 2912 aa3.34□□□□□ -1.87
HMGB3P19-201ENST00000403971 MYO9AB2RTY4 2548 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HECTD1Q9ULT8 2610 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CSMD2Q7Z408 3487 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 MEIKINA0A087WXM9 373 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TRGV10A0A0A0MS01 117 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TRBV6-7A0A0A0MS04 114 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 hADV38S2A0JD32 116 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF729A6NN14 1252 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 DISC1C4P0D8 188 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 C15orf65H3BRN8 121 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms