RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 WDR61Q9GZS3 305 aaKnown RBP1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 NMNAT1Q9HAN9 279 aaPredicted RBP1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 OPTCQ9UBM4 332 aa1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 ARL5AQ9Y689 179 aa1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 HECW1Q76N89 1606 aa1.69□□□□□ -2.14
C1GALT1-202ENST00000402468 ZNF532Q9HCE3 1301 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 PLXND1Q9Y4D7 1925 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 MAST2Q6P0Q8 1798 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 A0A0G2JQZ4 141 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 GGT3PA6NGU5 568 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 GPX1P07203 203 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 SRP19P09132 144 aaKnown RBP1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 DEFA4P12838 97 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 PEBP1P30086 187 aaKnown RBP1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 HIST1H3AP68431 136 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 HBA1P69905 142 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 H3F3AP84243 136 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 IMMP2LQ96T52 175 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 HOPXQ9BPY8 73 aaPredicted RBP1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 SELENOSQ9BQE4 189 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 PRTFDC1Q9NRG1 225 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 FBXL12Q9NXK8 326 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 SORL1Q92673 2214 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 COL5A3P25940 1745 aaPredicted RBP1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 REREQ9P2R6 1566 aa1.68□□□□□ -2.14
C1GALT1-202ENST00000402468 TTC21AQ8NDW8 1320 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 FAM159BA6NKW6 160 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 SIGLEC16A6NMB1 481 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 H3BT86 120 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 LEPROTO15243 131 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 SMIM17P0DL12 118 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 MSNP26038 577 aaKnown RBP1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 HLA-DMBP28068 263 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 IAH1Q2TAA2 248 aaPredicted RBP1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 TMEM42Q69YG0 159 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 DHRS4L2Q6PKH6 230 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 Q6ZS49 121 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 C10orf126Q8N4M7 172 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 OR51T1Q8NGJ9 327 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 MCFD2Q8NI22 146 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 COMMD5Q9GZQ3 224 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 EFCAB1Q9HAE3 211 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 C8orf4Q9NR00 106 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 ARMC1Q9NVT9 282 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 TP73-AS1Q9UF72 201 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 NAT8Q9UHE5 227 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 FUT9Q9Y231 359 aa1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 UTP11Q9Y3A2 253 aaKnown RBP1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 RBM7Q9Y580 266 aaKnown RBP1.67□□□□□ -2.14
C1GALT1-202ENST00000402468 hCG_1818297A0A087WSY0 165 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 TMSB15BA0A087X1C1 80 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 IGKV1D-43A0A0B4J1Z2 117 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 TRAV38-1A0A0B4J264 116 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 A8MT66 165 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 CLDN25C9JDP6 229 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 E5RI56 91 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 H7C2G1 150 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 PIRO00625 290 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 FABP1P07148 127 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 MSMBP08118 114 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 RAB14P61106 215 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 RPL19P84098 196 aaKnown RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 HES1Q14469 280 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 ARHGAP11BQ3KRB8 267 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 LRRC28Q86X40 367 aaPredicted RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 OR52L1Q8NGH7 329 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 NEK7Q8TDX7 302 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 CT55Q8WUE5 264 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 TSPAN32Q96QS1 320 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 NIPSNAP1Q9BPW8 284 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 TIMM21Q9BVV7 248 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 CCDC90BQ9GZT6 254 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 IL36BQ9NZH7 164 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 ATPIF1Q9UII2 106 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 CYSLTR1Q9Y271 337 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 TIMM22Q9Y584 194 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 DENND4BO75064 1496 aaPredicted RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 ZNF106Q9H2Y7 1883 aaKnown RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 CCDC88CQ9P219 2028 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 MYH3P11055 1940 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 PIK3C2GO75747 1445 aa1.66□□□□□ -2.14
C1GALT1-202ENST00000402468 PXDNLA1KZ92 1463 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 ROBO3Q96MS0 1386 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 MEIKINA0A087WXM9 373 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 EXOC1LA0A1B0GW35 172 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 DPRXA6NFQ7 191 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 ZNF860A6NHJ4 632 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 C1QAP02745 245 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 PRM2P04554 102 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 SERPINE1P05121 402 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 LGALS1P09382 135 aaKnown RBP1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 NFYAP23511 347 aaPredicted RBP1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 KRR1Q13601 381 aaKnown RBP1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
C1GALT1-202ENST00000402468 OOSP2Q86WS3 158 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms