RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 RCL1Q9Y2P8 373 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-202ENST00000399295 CMYA5Q8N3K9 4069 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 G3V318 75 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 SYNGR2O43760 224 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 RBMXL2O75526 392 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 CA2P00918 260 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 IL6RP08887 468 aaPredicted RBP13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 FGF2P09038 288 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 CXCL2P19875 107 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 S100A11P31949 105 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 TAS2R30P59541 319 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 POLR2GP62487 172 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 NDPQ00604 133 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 CFHR3Q02985 330 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 VMA21Q3ZAQ7 101 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 PPP1R27Q86WC6 154 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 KCNRGQ8N5I3 272 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 ABHD5Q8WTS1 349 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 TPSG1Q9NRR2 321 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 PRNDQ9UKY0 176 aa13.69□□□□□ -0.22
SMIM11A-202ENST00000399295 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 RNF222A6NCQ9 220 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 SSSCA1O60232 199 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 IGHG4P01861 327 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 CRYGBP07316 175 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 ELANEP08246 267 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 UBE2KP61086 200 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 RPL23AP62750 156 aaKnown RBP13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 FOXE3Q13461 319 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 PDLIM3Q53GG5 364 aaPredicted RBP13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 TMUB2Q71RG4 321 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 PUSL1Q8N0Z8 303 aaKnown RBP13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 CIB3Q96Q77 187 aaPredicted RBP13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 FOXA2Q9Y261 457 aaPredicted RBP13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 FBXO7Q9Y3I1 522 aa13.68□□□□□ -0.22
SMIM11A-202ENST00000399295 C15orf61A6NNL5 157 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 UPK2O00526 184 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 SAA1P0DJI8 122 aaPredicted RBP13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 PF4V1P10720 104 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 RPL12P30050 165 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 PPIFP30405 207 aaKnown RBP13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 SPCS3P61009 180 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 TMEM267Q0VDI3 215 aaPredicted RBP13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 PJVKQ0ZLH3 352 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 TMEM167AQ8TBQ9 72 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 SLC25A31Q9H0C2 315 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 ZNF257Q9Y2Q1 563 aa13.67□□□□□ -0.22
SMIM11A-202ENST00000399295 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 KBTBD11O94819 623 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 CNIH1O95406 144 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 RPLP1P05386 114 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 EGR2P11161 476 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 GNB1P62873 340 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 FXYD3Q14802 87 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 OPCMLQ14982 345 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 LCNL1Q6ZST4 164 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 OR2C3Q8N628 320 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 RNF152Q8N8N0 203 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 ARPC1AQ92747 370 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 FAM103A1Q9BTL3 118 aaKnown RBP13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 SLA2Q9H6Q3 261 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 LYRM2Q9NU23 88 aaPredicted RBP13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
SMIM11A-202ENST00000399295 NUDT19A8MXV4 375 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 TAAR5O14804 337 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 TSC22D2O75157 780 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 IFNA17P01571 189 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 PSMB8P28062 276 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 CRIP2P52943 208 aaPredicted RBP13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 AP2S1P53680 142 aaPredicted RBP13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 HSPE1P61604 102 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 C19orf54Q5BKX5 351 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 RBKSQ9H477 322 aa13.65□□□□□ -0.22
SMIM11A-202ENST00000399295 BCL2L11O43521 198 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 NXPH3O95157 252 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 IGLV1-40P01703 118 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 OR2B8PP59922 312 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 SSBP2P81877 361 aaPredicted RBP13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 BAXQ07812 192 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 PRSS8Q16651 343 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 AKIRIN2Q53H80 203 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 UNQ5815/PRO19632Q6UWF5 114 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 C18orf65Q6ZTR6 163 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
SMIM11A-202ENST00000399295 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms