RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 F8W036 122 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 J3QLI3 93 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 FOSL1P15407 271 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 FGF7P21781 194 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 PRTN3P24158 256 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 NPY1RP25929 384 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 CD1BP29016 333 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 LGALS7P47929 136 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 RAB11AP62491 216 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 CCL20P78556 96 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 RCC1LQ96I51 464 aaKnown RBP12.13□□□□□ -0.47
SCAF11-204ENST00000395454 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
SCAF11-204ENST00000395454 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 AVPP01185 164 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 MBP02144 154 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 COX7A1P24310 79 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 RPL8P62917 257 aaKnown RBP12.13□□□□□ -0.47
SCAF11-204ENST00000395454 KLRD1Q13241 179 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 GUCA2BQ16661 112 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 PLEKHA3Q9HB20 300 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
SCAF11-204ENST00000395454 LSM4Q9Y4Z0 139 aaKnown RBP12.13□□□□□ -0.47
SCAF11-204ENST00000395454 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 RAB2AP61019 212 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 ANK3Q12955 4377 aaKnown RBP12.12□□□□□ -0.47
SCAF11-204ENST00000395454 MXRA5Q9NR99 2828 aa12.12□□□□□ -0.47
SCAF11-204ENST00000395454 TRAV40A0A0B4J280 105 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 LY6G6DO95868 133 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 IGKV1D-33P01593 117 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 IGKV1-33P01594 117 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 MYOD1P15172 320 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 DEFA5Q01523 94 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 MRGPRG-AS1Q2M3A8 158 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 C2orf83Q53S99 150 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 TREML4Q6UXN2 200 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 PNKDQ8N490 385 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
SCAF11-204ENST00000395454 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-204ENST00000395454 CUBNO60494 3623 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 CA2P00918 260 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 CRYGBP07316 175 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-204ENST00000395454 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
SCAF11-204ENST00000395454 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 RPS16P62249 146 aaKnown RBP12.1□□□□□ -0.47
SCAF11-204ENST00000395454 HABP2Q14520 560 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-204ENST00000395454 VMA21Q3ZAQ7 101 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-204ENST00000395454 SSX7Q7RTT5 188 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 RNF5Q99942 180 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 EIF5A2Q9GZV4 153 aaKnown RBP12.1□□□□□ -0.47
SCAF11-204ENST00000395454 SLC35B3Q9H1N7 401 aa12.1□□□□□ -0.47
SCAF11-204ENST00000395454 A0A1W2PPI3 338 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 SNAPINO95295 136 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 OPRK1P41145 380 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 ARSJQ5FYB0 599 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-204ENST00000395454 GSX1Q9H4S2 264 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-204ENST00000395454 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-204ENST00000395454 NAV3Q8IVL0 2385 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 CENPVL3A0A0U1RRI6 287 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
SCAF11-204ENST00000395454 IFNA4P05014 189 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 IGHV4-38-2P0DP08 117 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 RNASE2P10153 161 aaKnown RBP12.09□□□□□ -0.47
SCAF11-204ENST00000395454 PPT1P50897 306 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 IL17RELQ6ZVW7 336 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 NPVFQ9HCQ7 196 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 MTORP42345 2549 aa12.09□□□□□ -0.47
SCAF11-204ENST00000395454 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 A0A1W2PN81 502 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 NDUFS6O75380 124 aaKnown RBP12.08□□□□□ -0.48
SCAF11-204ENST00000395454 CHRNA7P36544 502 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-204ENST00000395454 BTN1A1Q13410 526 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 ICAM4Q14773 271 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 FFAR4Q5NUL3 377 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 LDLRAD2Q5SZI1 272 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms