RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 MYOD1P15172 320 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 FGF7P21781 194 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 MAS1LP35410 378 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 SNCAP37840 140 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 HABP2Q14520 560 aaPredicted RBP15.46■□□□□ 0.07
LMNB1-202ENST00000395354 C2orf83Q53S99 150 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 CCDC28AQ8IWP9 274 aa15.46■□□□□ 0.07
LMNB1-202ENST00000395354 C17orf112F2Z3M2 114 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 SLC25A17O43808 307 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 CA2P00918 260 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 H2AFB1P0C5Y9 115 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 ERHP84090 104 aaKnown RBP15.45■□□□□ 0.06
LMNB1-202ENST00000395354 CCDC144NLQ6NUI1 221 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 MMD2Q8IY49 270 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 ZNF430Q9H8G1 570 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-202ENST00000395354 HIVEP2P31629 2446 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 TET2Q6N021 2002 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-202ENST00000395354 TRAV1-1A0A0B4J248 108 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 TMEM218A2RU14 115 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 RNASEK-C17orf49H0YIS7 233 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 HBE1P02100 147 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 MBP02144 154 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 HOXB4P17483 251 aaPredicted RBP15.45■□□□□ 0.06
LMNB1-202ENST00000395354 RAB2AP61019 212 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 KLRD1Q13241 179 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 PSG5Q15238 335 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 TMEM41BQ5BJD5 291 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 LDLRAD2Q5SZI1 272 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 MRPL41Q8IXM3 137 aaKnown RBP15.45■□□□□ 0.06
LMNB1-202ENST00000395354 ZNF709Q8N972 641 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 RITA1Q96K30 269 aa15.45■□□□□ 0.06
LMNB1-202ENST00000395354 A0A1B0GW64 132 aa15.44■□□□□ 0.06
LMNB1-202ENST00000395354 CD5P06127 495 aa15.44■□□□□ 0.06
LMNB1-202ENST00000395354 PRSS8Q16651 343 aa15.44■□□□□ 0.06
LMNB1-202ENST00000395354 NPCDR1Q9BY65 106 aa15.44■□□□□ 0.06
LMNB1-202ENST00000395354 GSX1Q9H4S2 264 aaPredicted RBP15.44■□□□□ 0.06
LMNB1-202ENST00000395354 TBL2Q9Y4P3 447 aaKnown RBP15.44■□□□□ 0.06
LMNB1-202ENST00000395354 CENPVL3A0A0U1RRI6 287 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 TIMM23O14925 209 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 VENTXO95231 258 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 MRGPRG-AS1Q2M3A8 158 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 CFHR4Q92496 578 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 PBDC1Q9BVG4 233 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 NPVFQ9HCQ7 196 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 RPRMQ9NS64 109 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 SIGLEC9Q9Y336 463 aa15.43■□□□□ 0.06
LMNB1-202ENST00000395354 OPN1MWP04001 364 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 OPN1MW2P0DN77 364 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 OPN1MW3P0DN78 364 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 RNASE2P10153 161 aaKnown RBP15.42■□□□□ 0.06
LMNB1-202ENST00000395354 UBE2E1P51965 193 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 FAM120AOSQ5T036 256 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 SPSB3Q6PJ21 355 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 MBD3L1Q8WWY6 194 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 NARS2Q96I59 477 aaKnown RBP15.42■□□□□ 0.06
LMNB1-202ENST00000395354 TREM1Q9NP99 234 aa15.42■□□□□ 0.06
LMNB1-202ENST00000395354 IGHV3OR16-10A0A075B7F0 116 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 TRAV40A0A0B4J280 105 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 AGPAT2O15120 278 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 IGHV4-38-2P0DP08 117 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 LGALS4P56470 323 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 SRSF3P84103 164 aaKnown RBP15.41■□□□□ 0.06
LMNB1-202ENST00000395354 PEA15Q15121 130 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 KLF17Q5JT82 389 aaPredicted RBP15.41■□□□□ 0.06
LMNB1-202ENST00000395354 TREML4Q6UXN2 200 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 Q71RC1 249 aaPredicted RBP15.41■□□□□ 0.06
LMNB1-202ENST00000395354 NANPQ8TBE9 248 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 SMDT1Q9H4I9 107 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 KCNIP2Q9NS61 270 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 SVEP1Q4LDE5 3571 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 A0A1W2PRD5 423 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 A0A1W2PRF3 423 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 A0A1W2PRM7 423 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 CGB1A6NKQ9 187 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 SUB1P53999 127 aaKnown RBP eCLIP15.41■□□□□ 0.06
LMNB1-202ENST00000395354 LHFPL4Q7Z7J7 247 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 PPP1R27Q86WC6 154 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 TEX29Q8N6K0 151 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 SCRT1Q9BWW7 348 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 TPSG1Q9NRR2 321 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 KIAA1456Q9P272 454 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 METTL1Q9UBP6 276 aaKnown RBP15.41■□□□□ 0.06
LMNB1-202ENST00000395354 HILPDAQ9Y5L2 63 aa15.41■□□□□ 0.06
LMNB1-202ENST00000395354 MTORP42345 2549 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 NAV3Q8IVL0 2385 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 IGHV1-69DA0A0B4J2H0 117 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 ACTL6BO94805 426 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 MOSP00540 346 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 IGHV1-69P01742 117 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 GUK1Q16774 197 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 C10orf91Q5T1B1 145 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 NPBQ8NG41 125 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 OR10W1Q8NGF6 305 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 SFT2D1Q8WV19 159 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 TMEM160Q9NX00 188 aa15.4■□□□□ 0.06
LMNB1-202ENST00000395354 LSM4Q9Y4Z0 139 aaKnown RBP15.4■□□□□ 0.06
LMNB1-202ENST00000395354 SMCO3A2RU48 225 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 E7EUB6 86 aa15.39■□□□□ 0.05
LMNB1-202ENST00000395354 CNTFRP26992 372 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms