RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 C1orf196B1AJZ1 125 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 OR2C1O95371 312 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 FBP1P09467 338 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 AKR1C3P42330 323 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 PRRX1P54821 245 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 RPL8P62917 257 aaKnown RBP8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 BSXQ3C1V8 233 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 VMA21Q3ZAQ7 101 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 NEU4Q8WWR8 484 aaPredicted RBP8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 MGST2Q99735 147 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 BIN3Q9NQY0 253 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 PXMP4Q9Y6I8 212 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 PKDREJQ9NTG1 2253 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 COL8A2P25067 703 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 LGALS7P47929 136 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 ERHP84090 104 aaKnown RBP8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 MRPL41Q8IXM3 137 aaKnown RBP8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 OR8B3Q8NGG8 313 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 NANPQ8TBE9 248 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 TIMD4Q96H15 378 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 OR8B2Q96RD0 313 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 CTDSP1Q9GZU7 261 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 NDUFA4L2Q9NRX3 87 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 ZNRD1Q9P1U0 126 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 NAT8Q9UHE5 227 aa8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 AMMECR1Q9Y4X0 333 aaPredicted RBP8.5□□□□□ -1.05
POLR2J3-201ENST00000379340 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 YIF1AO95070 293 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 RAB5AP20339 215 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 CD81P60033 236 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 B2MP61769 119 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 HNF4GQ14541 408 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 ARSJQ5FYB0 599 aaPredicted RBP8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 WDR25Q64LD2 544 aaPredicted RBP8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 ZNF841Q6ZN19 808 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 CYP2G1PQ6ZSU1 146 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 TMEM144Q7Z5S9 345 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 C11orf42Q8N5U0 333 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 SLC35E1Q96K37 410 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 DCHS2Q6V1P9 2916 aa8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 ANKHD1Q8IWZ3 2542 aaKnown RBP8.49□□□□□ -1.05
POLR2J3-201ENST00000379340 F6UZH7 168 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PDE6DO43924 150 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 CXorf1O96002 111 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 MT-CO2P00403 227 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 RNASE2P10153 161 aaKnown RBP8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 GPX4P36969 197 aaPredicted RBP8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 SUB1P53999 127 aaKnown RBP eCLIP8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 RHOBP62745 196 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 HLA-DRB5Q30154 266 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 SMUG1Q53HV7 270 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 C11orf71Q6IPW1 123 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 C1QL4Q86Z23 238 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 CACNG8Q8WXS5 425 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 C19orf24Q9BVV8 132 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 CLEC7AQ9BXN2 247 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 IGHV2-26A0A0B4J1V2 119 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 IGLV1-47P01700 117 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 IGLV2-23P01705 113 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 AGAP20933 346 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 REG1BP48304 166 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PRR20EP86478 221 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PRR20CP86479 221 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PRR20DP86480 221 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PRR20BP86481 221 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 PRR20AP86496 221 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 FAM24BQ8N5W8 94 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 STPG3Q8N7X2 389 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 TEX45Q8NA69 505 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 OR4F5Q8NH21 305 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 RNASEH2CQ8TDP1 164 aaKnown RBP8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 ISOC2Q96AB3 205 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 OR4F4Q96R69 305 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 TMPRSS5Q9H3S3 457 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 ARL2-SNX15V9GYD0 113 aa8.48□□□□□ -1.05
POLR2J3-201ENST00000379340 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 CLDN34H7C241 214 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 HMGB3O15347 200 aaKnown RBP8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 TGOLN2O43493 480 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 PAGE4O60829 102 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 TSPAN9O75954 239 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 VENTXO95231 258 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 LIPFP07098 398 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 MYOD1P15172 320 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 RND2P52198 227 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms