RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 SLC23A3Q6PIS1 610 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 POM121L2Q96KW2 1035 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 FGF21Q9NSA1 209 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 R4GN57 208 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 XIRP2A4UGR9 3374 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 A0A1B0GX78 115 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 SPATA46Q5T0L3 261 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 ASPHD1Q5U4P2 390 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 S1PR3Q99500 378 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 DLL3Q9NYJ7 618 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 LOC102723996A0A087X1L8 192 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 SMIM17P0DL12 118 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 IGFBP2P18065 325 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 LGALS7P47929 136 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 CEBPDP49716 269 aaPredicted RBP9.16□□□□□ -0.94
USP6NL-202ENST00000379237 PSG7Q13046 419 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 TCF24Q7RTU0 167 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 SPACA3Q8IXA5 215 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 B4GALT7Q9UBV7 327 aa9.16□□□□□ -0.94
USP6NL-202ENST00000379237 AMMECR1Q9Y4X0 333 aaPredicted RBP9.16□□□□□ -0.94
USP6NL-202ENST00000379237 J3QR06 171 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 FOXH1O75593 365 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 FKBP2P26885 142 aaKnown RBP9.15□□□□□ -0.94
USP6NL-202ENST00000379237 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 PRSS1P07477 247 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 COL8A1P27658 744 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 CXCL12P48061 93 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 VWC2Q2TAL6 325 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 NEUROG1Q92886 237 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 ZNF837Q96EG3 531 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-202ENST00000379237 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
USP6NL-202ENST00000379237 CXCL13O43927 109 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 APOBEC3AP31941 199 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-202ENST00000379237 YRDCQ86U90 279 aaKnown RBP9.15□□□□□ -0.94
USP6NL-202ENST00000379237 GRAMD2BQ96HH9 432 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 OBP2BQ9NPH6 170 aa9.15□□□□□ -0.94
USP6NL-202ENST00000379237 EML5Q05BV3 1969 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 IGKV1-39P01597 117 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.95
USP6NL-202ENST00000379237 IGKV1D-39P04432 117 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 EFNB3Q15768 340 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 TMEM196Q5HYL7 178 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 WIPI1Q5MNZ9 446 aaPredicted RBP9.15□□□□□ -0.95
USP6NL-202ENST00000379237 PHF7Q9BWX1 381 aaPredicted RBP9.15□□□□□ -0.95
USP6NL-202ENST00000379237 KIAA1549Q9HCM3 1950 aa9.15□□□□□ -0.95
USP6NL-202ENST00000379237 IGKV1-6A0A0C4DH72 117 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 C17orf98A8MV24 154 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 OR2H1Q9GZK4 316 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 NUP210Q8TEM1 1887 aaPredicted RBP9.14□□□□□ -0.95
USP6NL-202ENST00000379237 RIF1Q5UIP0 2472 aaKnown RBP9.14□□□□□ -0.95
USP6NL-202ENST00000379237 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 TMEM30CPA0ZSE6 113 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 PSMB11A5LHX3 300 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 H3BVH4 76 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 CD24P25063 80 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 KIR3DL3Q8N743 410 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 Q8N976 141 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 RAB1CQ92928 201 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF576Q9H609 170 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 CELA3AP09093 270 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 LHX8Q68G74 356 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 RABAC1Q9UI14 185 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 POLDIP2Q9Y2S7 368 aa9.14□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF645Q8N7E2 425 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 PLSCR4Q9NRQ2 329 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 CYSLTR1Q9Y271 337 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 TMEM240Q5SV17 173 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 TREML4Q6UXN2 200 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 LINC00173Q6ZV60 143 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 OR2Z1Q8NG97 314 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 RTL8AQ9BWD3 113 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 GGTLC1Q9BX51 225 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 P04436 131 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 PTGDSP41222 190 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ARG2P78540 354 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ZADH2Q8N4Q0 377 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ZBTB34Q8NCN2 500 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ANAPC1Q9H1A4 1944 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 TNRC6AQ8NDV7 1962 aaKnown RBP9.13□□□□□ -0.95
USP6NL-202ENST00000379237 hCG_38984A0A1B0GV85 526 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 C9orf172C9J069 976 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 APOMO95445 188 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF585BQ52M93 769 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
USP6NL-202ENST00000379237 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 MYO15AQ9UKN7 3530 aa9.13□□□□□ -0.95
USP6NL-202ENST00000379237 NUP210LQ5VU65 1888 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 CLPSP04118 112 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 SSC4DQ8WTU2 575 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 USF3Q68DE3 2245 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 COX8AP10176 69 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms