RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 DPRXA6NFQ7 191 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 ADH4P08319 380 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 WDR73Q6P4I2 378 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 SEPSECSQ9HD40 501 aaKnown RBP13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 M0QZ24 198 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 MT-ND6P03923 174 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 SLC35B1P78383 322 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 PRAMEF5Q5TYX0 476 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 ICE1Q9Y2F5 2266 aa13.68□□□□□ -0.22
PCDHA1-201ENST00000378133 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 FOXH1O75593 365 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 MT-CO2P00403 227 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 C3orf79P0CE67 100 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 SRSF6Q13247 344 aaKnown RBP13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 KLHDC1Q8N7A1 406 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 C11orf52Q96A22 123 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 M0R1X1 148 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 NKX2-8O15522 239 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 IGHG3P01860 377 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 PRRX1P54821 245 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 CX3CL1P78423 397 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 MORN2Q502X0 79 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 RPL39P5Q59GN2 51 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 Q6ZVH6 145 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 OR4A16Q8NH70 328 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 Q8TCH9 128 aa13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
PCDHA1-201ENST00000378133 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 COL8A2P25067 703 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 EFNB3Q15768 340 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 TMEM136Q6ZRR5 245 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 ABHD12Q8N2K0 398 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 FDCSPQ8NFU4 85 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 SRIP30626 198 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 HINT1P49773 126 aaPredicted RBP13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 GNG4P50150 75 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 ZNF134P52741 427 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 RHOBP62745 196 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 FAM19A2Q8N3H0 131 aa13.66□□□□□ -0.22
PCDHA1-201ENST00000378133 IGKV1D-17A0A075B6S4 117 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 IGHV2OR16-5A0A0B4J2B6 119 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 HELTA6NFD8 242 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 PPBPP02775 128 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 DOLPP1Q86YN1 238 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 OR4P4Q8NGL7 312 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 RNASE7Q9H1E1 156 aaKnown RBP13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 DUSP13Q9UII6 198 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 IGHV3OR15-7A0A075B7D8 119 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 IGHV1-18A0A0C4DH31 117 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 CGAP01215 116 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 TCL1AP56279 114 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 NIT1Q86X76 327 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 ATOH7Q8N100 152 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 BORCS7Q96B45 105 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 OTOGLQ3ZCN5 2332 aa13.65□□□□□ -0.22
PCDHA1-201ENST00000378133 NTF3P20783 257 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 FXYD3Q14802 87 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 PQLC2Q6ZP29 291 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 ZNRF1Q8ND25 227 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 CACNA1GO43497 2377 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 TSPOP30536 169 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 UBE2V1Q13404 147 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 TRAT1Q6PIZ9 186 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 PIP4P1Q86T03 277 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 RNF24Q9Y225 148 aa13.64□□□□□ -0.23
PCDHA1-201ENST00000378133 BOD1L1Q8NFC6 3051 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 REG1AP05451 166 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 VDAC2P45880 294 aaPredicted RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 COX19Q49B96 90 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 UTF1Q5T230 341 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 UNQ5815/PRO19632Q6UWF5 114 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 FAM90A1Q86YD7 464 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 STPG3Q8N7X2 389 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 TSKUQ8WUA8 353 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 C1orf159Q96HA4 380 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 BMPR1BO00238 502 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 GFRA3O60609 400 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 CRYBB3P26998 211 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 MSMPQ1L6U9 139 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 SPRNQ5BIV9 151 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 C1orf229Q6ZS94 237 aaPredicted RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms