RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 GCSAMLQ5JQS6 135 aa10.4□□□□□ -0.74
NPLOC4-202ENST00000374747 TMEM171Q8WVE6 324 aa10.4□□□□□ -0.74
NPLOC4-202ENST00000374747 TMEM186Q96B77 213 aa10.4□□□□□ -0.74
NPLOC4-202ENST00000374747 GEMIN7Q9H840 131 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-202ENST00000374747 TUBA4BQ9H853 241 aa10.4□□□□□ -0.74
NPLOC4-202ENST00000374747 RNF222A6NCQ9 220 aa10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 REG1AP05451 166 aa10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 EP300Q09472 2414 aaPredicted RBP10.4□□□□□ -0.75
NPLOC4-202ENST00000374747 IGLV3-32A0A0A0MS00 114 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A0G2JK05 382 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 TPRP12270 2363 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1B0GWB2 263 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 DNM1P46Q6ZS02 220 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 KLF14Q8TD94 323 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 SVILO95425 2214 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 PPP1R17O96001 155 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 RSPO4Q2I0M5 234 aaPredicted RBP10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 ST6GALNAC3Q8NDV1 305 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 COL6A3P12111 3177 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 PLXNA2O75051 1894 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 SLC17A3O00476 420 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 LEAP2Q969E1 77 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 PRELID3AQ96N28 172 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 THADAQ6YHU6 1953 aa10.39□□□□□ -0.75
NPLOC4-202ENST00000374747 TBR1Q16650 682 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 PSMG4Q5JS54 123 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 PCSK4Q6UW60 755 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 GVINP1Q7Z2Y8 2422 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 CNOT1A5YKK6 2376 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 ZNF56Q15929 161 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 PRDM13Q9H4Q3 707 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 J3QW42 95 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 SPCS1Q9Y6A9 102 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 COL4A3Q01955 1670 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 FREM2Q5SZK8 3169 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 UCP1P25874 307 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 MOSP00540 346 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 TSPOP30536 169 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 ZNF418Q8TF45 676 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 C18orf15Q96N68 181 aa10.38□□□□□ -0.75
NPLOC4-202ENST00000374747 RAMP1O60894 148 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 ATP5LO75964 103 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 CGAP01215 116 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 TCF23Q7RTU1 214 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 LRTM2Q8N967 370 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 OR5P3Q8WZ94 311 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 TRAV14DV4A0A0A6YYC5 116 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 FAM106AQ4KMX7 169 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 TMEM170BQ5T4T1 132 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 CELA3AP09093 270 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 NRN1LQ496H8 165 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 ST6GALNAC6Q969X2 333 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 RAX2Q96IS3 184 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 FOXI3A8MTJ6 420 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 NPIPB11E5RHQ5 1161 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 Q6ZT83 130 aa10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 RTBDNQ9BSG5 229 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 ALKBH7Q9BT30 221 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-202ENST00000374747 LDLRAD4O15165 306 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 LYPD3O95274 346 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 NBEAP1P0C6P0 100 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 ICAM4Q14773 271 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 KIF26BQ2KJY2 2108 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 JKAMPQ9P055 326 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 KIF26AQ9ULI4 1882 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 PPIAL4CA0A0B4J2A2 164 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A0G2JMM0 328 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1W2PPB8 328 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1W2PRS3 328 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 KIR3DP1A8MWS1 328 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 PEX7O00628 323 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 PPIAL4GP0DN37 164 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 NPPCP23582 126 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 TFF3Q07654 80 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 ZNF324BQ6AW86 544 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 NBEAQ8NFP9 2946 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 SNAI2O43623 268 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 IGHV3-48P01763 117 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 IFI27L2Q9H2X8 130 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 ATP5G2Q06055 141 aa10.36□□□□□ -0.75
NPLOC4-202ENST00000374747 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1B0GW15 77 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms