RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 OR2T6Q8NHC8 308 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 IGHV2-5P01817 119 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 NDUFA6P56556 154 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 OR4P4Q8NGL7 312 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 ACY3Q96HD9 319 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 ZNF257Q9Y2Q1 563 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 UBE2CO00762 179 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 COX7A1P24310 79 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 KLRB1Q12918 225 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 GAMTQ14353 236 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 FAM78BQ5VT40 261 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 ZNF114Q8NC26 417 aa12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 ZNF430Q9H8G1 570 aaPredicted RBP12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 YTHDF2Q9Y5A9 579 aaKnown RBP12.94□□□□□ -0.34
CNKSR1-202ENST00000374253 WNK2Q9Y3S1 2297 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 CNTFRP26992 372 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 OR10J1P30954 320 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 CHRNA7P36544 502 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 SSBP2P81877 361 aaPredicted RBP12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 LY6DQ14210 128 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 OR4C13Q8NGP0 309 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 ST6GALNAC6Q969X2 333 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 VPS13CQ709C8 3753 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 AP4M1O00189 453 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 MEOX2P50222 304 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM177Q53S58 311 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 RAB1CQ92928 201 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 NDUFA4L2Q9NRX3 87 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 KAAG1Q9UBP8 84 aa12.93□□□□□ -0.34
CNKSR1-202ENST00000374253 CGB1A6NKQ9 187 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 LINC00869P0C866 280 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 LGALS4P56470 323 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 RAB31Q13636 194 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 OR5B3Q8NH48 314 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM133Q9H2Q1 129 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 CXorf1O96002 111 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 IGLV2-23P01705 113 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 RND2P52198 227 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 C1QL4Q86Z23 238 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 DOK5Q9P104 306 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
CNKSR1-202ENST00000374253 H7BYZ3 331 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 GCHFRP30047 84 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 PRR20EP86478 221 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 PRR20CP86479 221 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 PRR20DP86480 221 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 PRR20BP86481 221 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 PRR20AP86496 221 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 FRZBQ92765 325 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 TRBV20OR9-2A0A075B6H5 130 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 C1QTNF9P0C862 333 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 RHOBP62745 196 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 ST6GALNAC3Q8NDV1 305 aa12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 METTL1Q9UBP6 276 aaKnown RBP12.91□□□□□ -0.34
CNKSR1-202ENST00000374253 IGHV2-26A0A0B4J1V2 119 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 GALR1P47211 349 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 UCNP55089 124 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 C2orf83Q53S99 150 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 ZNF841Q6ZN19 808 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 PDPNQ86YL7 162 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 NANPQ8TBE9 248 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 SLC45A2Q9UMX9 530 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 MAP1AP78559 2803 aaPredicted RBP12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 IGHV3-21A0A0B4J1V1 117 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 CLN5O75503 358 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 OR10J4P0C629 311 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 PPOXP50336 477 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 RUSC1-AS1Q66K80 236 aa12.9□□□□□ -0.34
CNKSR1-202ENST00000374253 HCP5Q6MZN7 132 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms