RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 COX7A2P2O60397 106 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 ERVFC1-1P60608 527 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 ZNF90Q03938 601 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 TMEM200BQ69YZ2 307 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 PNKDQ8N490 385 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 STPG3Q8N7X2 389 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 RBM14Q96PK6 669 aaKnown RBP10.85□□□□□ -0.67
NCDN-203ENST00000373253 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
NCDN-203ENST00000373253 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
NCDN-203ENST00000373253 RYDENQ9NUL5 291 aaKnown RBP10.85□□□□□ -0.67
NCDN-203ENST00000373253 LMO1P25800 156 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
NCDN-203ENST00000373253 YPEL1O60688 119 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 KBTBD11O94819 623 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 TMPRSS3P57727 454 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
NCDN-203ENST00000373253 HTD2P86397 168 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 MMDQ15546 238 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 ATP6V1FQ16864 119 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 YPEL2Q96QA6 119 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
NCDN-203ENST00000373253 FUT9Q9Y231 359 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 MTORP42345 2549 aa10.84□□□□□ -0.67
NCDN-203ENST00000373253 C15orf62A8K5M9 175 aa10.83□□□□□ -0.67
NCDN-203ENST00000373253 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.67
NCDN-203ENST00000373253 FXYD3Q14802 87 aa10.83□□□□□ -0.67
NCDN-203ENST00000373253 C1orf229Q6ZS94 237 aaPredicted RBP10.83□□□□□ -0.67
NCDN-203ENST00000373253 TIMD4Q96H15 378 aa10.83□□□□□ -0.67
NCDN-203ENST00000373253 FBXL15Q9H469 300 aa10.83□□□□□ -0.67
NCDN-203ENST00000373253 FOXH1O75593 365 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 RND2P52198 227 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 C17orf58Q2M2W7 97 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 ZNF835Q9Y2P0 537 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 PCP4P48539 62 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 GNB2P62879 340 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 ZNF506Q5JVG8 444 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 Q8NA96 180 aa10.83□□□□□ -0.68
NCDN-203ENST00000373253 PPIAL4CA0A0B4J2A2 164 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 SRRM4A7MD48 611 aaKnown RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 PPIAL4GP0DN37 164 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 UBE2L3P68036 154 aaKnown RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 VMA21Q3ZAQ7 101 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 TMEM14EPQ6UXP3 125 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 MRPL41Q8IXM3 137 aaKnown RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 ZNF295-AS1Q8N0V1 137 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 OR4X1Q8NH49 305 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 SEBOXQ9HB31 216 aaPredicted RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 SCO2A0A1W2PP80 73 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 FAM90A26D6RGX4 464 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 SLC17A3O00476 420 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 NDUFS7O75251 213 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 RHOBP62745 196 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 OR5I1Q13606 314 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 SRSF7Q16629 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
NCDN-203ENST00000373253 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 IL6RP08887 468 aaPredicted RBP10.82□□□□□ -0.68
NCDN-203ENST00000373253 AGAP20933 346 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 CRYBB3P26998 211 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 LYZP61626 148 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
NCDN-203ENST00000373253 TRAV5A0A0B4J249 113 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 TRAV34A0A0B4J273 112 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 IGHV3-23P01764 117 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 C1QTNF9P0C862 333 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 LINC00869P0C866 280 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 ZNF25P17030 456 aaPredicted RBP10.81□□□□□ -0.68
NCDN-203ENST00000373253 IL3RAP26951 378 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
NCDN-203ENST00000373253 OR1L8Q8NGR8 309 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 TNFRSF19Q9NS68 423 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 PRNDQ9UKY0 176 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 C2CD3Q4AC94 2353 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 THBDP07204 575 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 RELBQ01201 579 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 KLRD1Q13241 179 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 ZNF788Q6ZQV5 615 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 SGMS2Q8NHU3 365 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 Q8TCH9 128 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 RPUSD1Q9UJJ7 312 aaKnown RBP10.81□□□□□ -0.68
NCDN-203ENST00000373253 CT45A6P0DMU7 189 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 CT45A5P0DMU8 189 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 CT45A7P0DMV0 189 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 CNTFRP26992 372 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
NCDN-203ENST00000373253 LOXL3P58215 753 aa10.81□□□□□ -0.68
NCDN-203ENST00000373253 TAS2R60P59551 318 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 REC114Q7Z4M0 266 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 ADTRPQ96IZ2 230 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 NABP2Q9BQ15 211 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 TUBG2Q9NRH3 451 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
NCDN-203ENST00000373253 CDX1P47902 265 aaPredicted RBP10.8□□□□□ -0.68
NCDN-203ENST00000373253 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms