RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 C11orf53Q8IXP5 236 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 DCTN5Q9BTE1 182 aa9.57□□□□□ -0.88
SMARCA1-201ENST00000371121 J3QT63 122 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 IGLC1P0CG04 106 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 PPOXP50336 477 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 IGHV1-24A0A0C4DH33 117 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 A0A1B0GXF2 115 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 RNF212BA8MTL3 300 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 SMPD2O60906 423 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 P04436 131 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 ZNF134P52741 427 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 GUSBP11Q6P575 273 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 BSNQ9UPA5 3926 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 TACC2O95359 2948 aa9.56□□□□□ -0.88
SMARCA1-201ENST00000371121 IGKV3D-15A0A087WSY6 115 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 CELA3AP09093 270 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 FAM90A1Q86YD7 464 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 TUSC5Q8IXB3 177 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 COMMD5Q9GZQ3 224 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 COL27A1Q8IZC6 1860 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 A0A087X0K7 114 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 PSMB11A5LHX3 300 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 C15orf65H3BRN8 121 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 M0R2Z0 102 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 OR2J3O76001 311 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 ACTL6BO94805 426 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 USF1P22415 310 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 DSCAML1Q8TD84 2053 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 OR4C46A6NHA9 309 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 SSR4P51571 173 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 FAM71F2Q6NXP2 309 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 LINC00322Q6ZN03 302 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 Q71RC1 249 aaPredicted RBP9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 SPEM1Q8N4L4 309 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 OR13A1Q8NGR1 328 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 MPC1Q9Y5U8 109 aa9.55□□□□□ -0.88
SMARCA1-201ENST00000371121 TMEM11P17152 192 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 EN2P19622 333 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 SLC24A4Q8NFF2 622 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 GALMQ96C23 342 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 MEGF9Q9H1U4 602 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 KCNIP1Q9NZI2 227 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 PSG5Q15238 335 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 LINC00696Q6ZRV3 163 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 SNRNP40Q96DI7 357 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 C1RLQ9NZP8 487 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 WDR31Q8NA23 367 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 FAM167A-AS1Q96KT0 104 aa9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 KLF13Q9Y2Y9 288 aaPredicted RBP9.54□□□□□ -0.88
SMARCA1-201ENST00000371121 FSTL3O95633 263 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 MLANAQ16655 118 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 ZNF826PQ6ZT77 177 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 UBALD2Q8IYN6 164 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 CT55Q8WUE5 264 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 LINC00470Q9BZP3 86 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 HAND1O96004 215 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 PPIAL4GP0DN37 164 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 RFESDQ8TAC1 157 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 ZNF596Q8TC21 504 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 NPVFQ9HCQ7 196 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 GJE1A6NN92 205 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 J3QR06 171 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 GOSR1O95249 250 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 RPL39P5Q59GN2 51 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 DDB2Q92466 427 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 NCOR1P1Q9H4R4 102 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 PSG11Q9UQ72 335 aa9.53□□□□□ -0.88
SMARCA1-201ENST00000371121 DYSFO75923 2080 aa9.52□□□□□ -0.88
SMARCA1-201ENST00000371121 TNCP24821 2201 aa9.52□□□□□ -0.88
SMARCA1-201ENST00000371121 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 G3V4G9 280 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 RBMXL2O75526 392 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 LGALS7P47929 136 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 TMEM70Q9BUB7 260 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 IL19Q9UHD0 177 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 ARL2-SNX15V9GYD0 113 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 CACNA1EQ15878 2313 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 FGF6P10767 208 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 SLC25A2Q9BXI2 301 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 PRR14LQ5THK1 2151 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 ANKRD30BLA7E2S9 258 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 KLK10O43240 276 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 FCGR3BO75015 233 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms