RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 LY6EQ16553 131 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 IFI27L2Q9H2X8 130 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 CBLN4Q9NTU7 201 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 THYN1Q9P016 225 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 PKD1L2Q7Z442 2459 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 TSTD3H0UI37 97 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 MPDU1O75352 247 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 CCKARP32238 428 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 FAM3BP58499 235 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 GATAD1Q8WUU5 269 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 MS4A10Q96PG2 267 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 CTDSP1Q9GZU7 261 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 CHODLQ9H9P2 273 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 TNRC18O15417 2968 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 IGHV3OR16-13A0A075B7E8 117 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 IGHV3-74A0A0B4J1X5 117 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 NDUFS7O75251 213 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 IGHV3-23P01764 117 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 SLC16A13Q7RTY0 426 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 NHLRC2Q8NBF2 726 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 ST6GALNAC3Q8NDV1 305 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 OR5B3Q8NH48 314 aa5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 PSMG3Q9BT73 122 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF331Q9NQX6 463 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-202ENST00000370399 COL4A2P08572 1712 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 ARHGAP32A7KAX9 2087 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 KIAA1549Q9HCM3 1950 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 HELTA6NFD8 242 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 C15orf61A6NNL5 157 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF785A8K8V0 405 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 IL6RP08887 468 aaPredicted RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CSN1S1P47710 185 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 LGALS7P47929 136 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 UQCRFS1P47985 274 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 PNRC1Q12796 327 aaPredicted RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 FXYD3Q14802 87 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CCDC144NLQ6NUI1 221 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 PDPNQ86YL7 162 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 OR8I2Q8N0Y5 310 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 RPP25LQ8N5L8 163 aaKnown RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 MARVELD3Q96A59 401 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 TOLLIPQ9H0E2 274 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 PARLQ9H300 379 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 C1RLQ9NZP8 487 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 AUP1Q9Y679 476 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 C9JQL5 133 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 UPK2O00526 184 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CLEC3BP05452 202 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 THBDP07204 575 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 IGHV1-8P0DP01 117 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 PAX9P55771 341 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 KIR3DL3Q8N743 410 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 IFT22Q9H7X7 185 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 TMEM167BQ9NRX6 74 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 TRBV23-1A0A0A0MS06 115 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 K7EQM0 130 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 TIMM23O14925 209 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CLN5O75503 358 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CT45A10P0DMU9 189 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CRYBB3P26998 211 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 ATP5G3P48201 142 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 CAMPP49913 170 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 BORCS7Q96B45 105 aa5.85□□□□□ -1.47
TGFBR3-202ENST00000370399 NPIPB11E5RHQ5 1161 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 SRP19P09132 144 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 WNT2P09544 360 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 IL15RAQ13261 267 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 DIAPH2-AS1Q14236 149 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 DPPA3Q6W0C5 159 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 EIF4E3Q8N5X7 224 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 OR4F17Q8NGA8 305 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 OR10G8Q8NGN5 311 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 RBM14Q96PK6 669 aaKnown RBP5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 C12orf57Q99622 126 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 PAXXQ9BUH6 204 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 CENPEQ02224 2701 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 C15orf65H3BRN8 121 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 NTF3P20783 257 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 HLA-DRB5Q30154 266 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 C16orf82Q7Z2V1 217 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 OR2T10Q8NGZ9 312 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 SGMS2Q8NHU3 365 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 IGFBPL1Q8WX77 278 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF430Q9H8G1 570 aaPredicted RBP5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 DNAJC4Q9NNZ3 241 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 HIF1ANQ9NWT6 349 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 ZNF462Q96JM2 2506 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 IGHV2-26A0A0B4J1V2 119 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 PGPEP1LA6NFU8 196 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 RBFOX2O43251 390 aaKnown RBP eCLIP5.84□□□□□ -1.475e-7■■■■□ 21.2
TGFBR3-202ENST00000370399 HYPMO75409 117 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 LYL1P12980 280 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
TGFBR3-202ENST00000370399 UNQ5815/PRO19632Q6UWF5 114 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms