RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 GGTLC1Q9BX51 225 aa11.82□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF436Q9C0F3 470 aaPredicted RBP11.82□□□□□ -0.52
PDGFA-201ENST00000354513 TRBV7-1A0A0A6YYK4 115 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 IGHV3-35A0A0C4DH35 117 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 S1PR2O95136 353 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 CD74P04233 296 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 CLEC3BP05452 202 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 AKAIN1P0CW23 69 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 MFAP2P55001 183 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 TAS2R31P59538 309 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 AP3S2P59780 193 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 TSPAN5P62079 268 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 SLC16A13Q7RTY0 426 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 SLC5A7Q9GZV3 580 aa11.81□□□□□ -0.52
PDGFA-201ENST00000354513 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-201ENST00000354513 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-201ENST00000354513 DHFRP00374 187 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 IL7P13232 177 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 KLF9Q13886 244 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-201ENST00000354513 MEF2DQ14814 521 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 OR4D10Q8NGI6 311 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 GIMAP1Q8WWP7 306 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 CXorf58Q96LI9 332 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF2Q9BSG1 426 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-201ENST00000354513 HRASLSQ9HDD0 168 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 TMEM140Q9NV12 185 aa11.8□□□□□ -0.52
PDGFA-201ENST00000354513 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 HPRT1P00492 218 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 DEFA4P12838 97 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 FXYD4P59646 89 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 FAAP20Q6NZ36 180 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 TMEM17Q86X19 198 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
PDGFA-201ENST00000354513 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 TRAV25A0A0B4J276 109 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 LINC00854A0A1B0GVQ3 168 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 DISC1C4P0D8 188 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 TGOLN2O43493 480 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 FGF2P09038 288 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 RPA2P15927 270 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 NQO2P16083 231 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
PDGFA-201ENST00000354513 ELLP55199 621 aaPredicted RBP11.78□□□□□ -0.52
PDGFA-201ENST00000354513 HERV-K104P61576 105 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 OR51H1Q8NH63 302 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 MARC2Q969Z3 335 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
PDGFA-201ENST00000354513 MCUBQ9NWR8 336 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 MRPL27Q9P0M9 148 aaKnown RBP11.78□□□□□ -0.52
PDGFA-201ENST00000354513 UBQLN2Q9UHD9 624 aa11.78□□□□□ -0.52
PDGFA-201ENST00000354513 GNRHRP30968 328 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 CATR1Q13166 79 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 OR1L6Q8NGR2 347 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
PDGFA-201ENST00000354513 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
PDGFA-201ENST00000354513 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 TEX50A0A1B0GTY4 177 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 UPK1BO75841 260 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 SERPINE2P07093 398 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 ADMP35318 185 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 PLET1Q6UQ28 207 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 OR2C3Q8N628 320 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 OR51S1Q8NGJ8 323 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 DEDD2Q8WXF8 326 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
PDGFA-201ENST00000354513 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 OR2T8A6NH00 312 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 CENPXA8MT69 81 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 TSPAN4O14817 238 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 TNFRSF9Q07011 255 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
PDGFA-201ENST00000354513 PRRT1Q99946 306 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
PDGFA-201ENST00000354513 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms