RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GOSR1O95249 250 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 ATP5J2P56134 94 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 ERHP84090 104 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 PRSS8Q16651 343 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 BSXQ3C1V8 233 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 FBLN7Q53RD9 439 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 C1orf122Q6ZSJ8 110 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 DYNAPQ8N1N2 210 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 TEX45Q8NA69 505 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 SSMEM1Q8WWF3 244 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 GNG13Q9P2W3 67 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 CARHSP1Q9Y2V2 147 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 MAP1LC3B2A6NCE7 125 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 DNASE2O00115 360 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 NUPL2O15504 423 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 VENTXO95231 258 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 HBE1P02100 147 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 CRYGBP07316 175 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 OR13C7P0DN81 318 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 C2orf83Q53S99 150 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 MIC13Q5XKP0 118 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 KIR3DL3Q8N743 410 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 MBD3L1Q8WWY6 194 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 FAM168AQ92567 244 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 MAP1LC3BQ9GZQ8 125 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 SLC39A9Q9NUM3 307 aa17.99■□□□□ 0.47
PDLIM2-203ENST00000339162 TOX4O94842 621 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 FBP1P09467 338 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 CEACAM3P40198 252 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 SVBPQ8N300 66 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 TRAV1-1A0A0B4J248 108 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 TSPAN9O75954 239 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 ACTL6BO94805 426 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 CFHR4Q92496 578 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 PERPQ96FX8 193 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 GGTLC1Q9BX51 225 aa17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 LSM4Q9Y4Z0 139 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-203ENST00000339162 A0A1W2PN81 502 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 ZFP92A6NM28 416 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 FCN1O00602 326 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 CHRNA7P36544 502 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 PPP1R27Q86WC6 154 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 RXFP4Q8TDU9 374 aa17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 NKX6-2Q9C056 277 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 UNKLQ9H9P5 680 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-203ENST00000339162 IGHV4-61A0A0C4DH41 118 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 TEPPQ6URK8 271 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 C19orf35Q6ZS72 473 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 MMD2Q8IY49 270 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 MPDU1O75352 247 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 CEBPGP53567 150 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 PLGLAQ15195 96 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 MMDQ15546 238 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 TBX15Q96SF7 602 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 PIMREGQ9BSJ6 248 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 TMPRSS5Q9H3S3 457 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 PXMP4Q9Y6I8 212 aa17.96■□□□□ 0.47
PDLIM2-203ENST00000339162 YIF1AO95070 293 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 IGHV3-48P01763 117 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 MBP02144 154 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 LGALS4P56470 323 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 HES1Q14469 280 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 ICAM4Q14773 271 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 RAB24Q969Q5 203 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 P2RX4Q99571 388 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 FBN2P35556 2912 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 AREGP15514 252 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 NPBWR1P48145 328 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 GAMTQ14353 236 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 C10orf105Q8TEF2 133 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 SLC35B3Q9H1N7 401 aa17.95■□□□□ 0.46
PDLIM2-203ENST00000339162 OPRK1P41145 380 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 RPL27AP46776 148 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 IGKV1OR2-108A0A075B7D4 117 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 IGHV4-30-2A0A087WSY4 118 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 IGLC7A0M8Q6 106 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 COMPP49747 757 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 ACOT6Q3I5F7 207 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 CLRN3Q8NCR9 226 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 OR2T6Q8NHC8 308 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 ACTR3CQ9C0K3 210 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 ABCA2Q9BZC7 2435 aa17.94■□□□□ 0.46
PDLIM2-203ENST00000339162 CELSR1Q9NYQ6 3014 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 CTXND1A0A1B0GTU2 59 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 INS-IGF2F8WCM5 200 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 FOXH1O75593 365 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 COX6B1P14854 86 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 SSBP2P81877 361 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 CD69Q07108 199 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 CLEC2AQ6UVW9 174 aa17.93■□□□□ 0.46
PDLIM2-203ENST00000339162 FAM74A7A6NL05 159 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 SNRNP70P08621 437 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 COL8A1P27658 744 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 FAM74A3Q4VXF1 159 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 AKIRIN2Q53H80 203 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 ZNF506Q5JVG8 444 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 EAF1Q96JC9 268 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 POLQO75417 2590 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 CYB5BO43169 146 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 ATP5IP56385 69 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms