RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 HIST1H2BLQ99880 126 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 KCNIP2Q9NS61 270 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 FKBP11Q9NYL4 201 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 CLDN34H7C241 214 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 TMEM155Q4W5P6 130 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 LINC00311Q8N616 119 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 ST6GALNAC3Q8NDV1 305 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 SSMEM1Q8WWF3 244 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 C2orf88Q9BSF0 95 aa14.15□□□□□ -0.14
DDX28-201ENST00000332395 TMEM177Q53S58 311 aa14.15□□□□□ -0.15
DDX28-201ENST00000332395 FAM71F2Q6NXP2 309 aa14.15□□□□□ -0.15
DDX28-201ENST00000332395 OR5B3Q8NH48 314 aa14.15□□□□□ -0.15
DDX28-201ENST00000332395 TMEM186Q96B77 213 aa14.15□□□□□ -0.15
DDX28-201ENST00000332395 PARLQ9H300 379 aa14.15□□□□□ -0.15
DDX28-201ENST00000332395 SIAH2O43255 324 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 TMEM241Q24JQ0 296 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 LBHQ53QV2 105 aaPredicted RBP14.14□□□□□ -0.15
DDX28-201ENST00000332395 FLYWCH2Q96CP2 140 aaKnown RBP14.14□□□□□ -0.15
DDX28-201ENST00000332395 NABP2Q9BQ15 211 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 PITPNC1Q9UKF7 332 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 TNCP24821 2201 aa14.14□□□□□ -0.15
DDX28-201ENST00000332395 SPTA1P02549 2419 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 TRBV24-1A0A075B6N3 115 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 C11orf94C9JXX5 98 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 ADIRFQ15847 76 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 ZNF124Q15973 351 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 C4orf17Q53FE4 359 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 MUC15Q8N387 334 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 NEIL1Q96FI4 390 aaPredicted RBP14.13□□□□□ -0.15
DDX28-201ENST00000332395 FNDC10F2Z333 226 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 RAB31Q13636 194 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 STPG3Q8N7X2 389 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 OR4C13Q8NGP0 309 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 OR9G1Q8NH87 305 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 ST6GALNAC6Q969X2 333 aa14.13□□□□□ -0.15
DDX28-201ENST00000332395 STAG3L2P0CL84 134 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 STAG3L3P0CL85 134 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 ARL14EPLP0DKL9 152 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 IGHV1-8P0DP01 117 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 JOSD1Q15040 202 aaPredicted RBP14.12□□□□□ -0.15
DDX28-201ENST00000332395 PDPNQ86YL7 162 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 LYNX1G3V0Z9 82 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 LYNX1P0DP58 116 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 IGFBP2P18065 325 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 RPL29P47914 159 aaKnown RBP14.12□□□□□ -0.15
DDX28-201ENST00000332395 ZNF137PP52743 207 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 UBE2G2P60604 165 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
DDX28-201ENST00000332395 BSXQ3C1V8 233 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 C2orf83Q53S99 150 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 TMEM183AQ8IXX5 376 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 RNASEH2CQ8TDP1 164 aaKnown RBP14.12□□□□□ -0.15
DDX28-201ENST00000332395 SSX3Q99909 188 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 COMMD5Q9GZQ3 224 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 CTDSP1Q9GZU7 261 aa14.12□□□□□ -0.15
DDX28-201ENST00000332395 RELNP78509 3460 aa14.11□□□□□ -0.15
DDX28-201ENST00000332395 ATP5IP56385 69 aaPredicted RBP14.11□□□□□ -0.15
DDX28-201ENST00000332395 RPL23P62829 140 aaKnown RBP14.11□□□□□ -0.15
DDX28-201ENST00000332395 SSX2Q16385 188 aa14.11□□□□□ -0.15
DDX28-201ENST00000332395 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
DDX28-201ENST00000332395 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
DDX28-201ENST00000332395 CXorf1O96002 111 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 RNASE2P10153 161 aaKnown RBP14.1□□□□□ -0.15
DDX28-201ENST00000332395 USF1P22415 310 aaPredicted RBP14.1□□□□□ -0.15
DDX28-201ENST00000332395 COL8A2P25067 703 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 ADORA2A-AS1P86434 159 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 CDSNQ15517 529 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 ZNF672Q499Z4 452 aaPredicted RBP14.1□□□□□ -0.15
DDX28-201ENST00000332395 CST9LP1Q5W188 147 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 TGIF2LXQ8IUE1 241 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 OR1L8Q8NGR8 309 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 MISP3Q96FF7 219 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 NDUFA4L2Q9NRX3 87 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 WASHC3Q9Y3C0 194 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PDE6DO43924 150 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 NPPCP23582 126 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 ATP5G3P48201 142 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PRR20EP86478 221 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PRR20CP86479 221 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PRR20DP86480 221 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PRR20BP86481 221 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 PRR20AP86496 221 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 MOB3BQ86TA1 216 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 VSTM2AQ8TAG5 236 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 TMEM133Q9H2Q1 129 aa14.1□□□□□ -0.15
DDX28-201ENST00000332395 SEPSECSQ9HD40 501 aaKnown RBP14.1□□□□□ -0.15
DDX28-201ENST00000332395 RALYQ9UKM9 306 aaKnown RBP14.1□□□□□ -0.15
DDX28-201ENST00000332395 A8MWP6 167 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 GZMBP10144 247 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 TMEM144Q7Z5S9 345 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 OR51G1Q8NGK1 321 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 OR4X1Q8NH49 305 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 OR4A5Q8NH83 315 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 TMEM167AQ8TBQ9 72 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 NOL4LQ96MY1 436 aaPredicted RBP14.09□□□□□ -0.15
DDX28-201ENST00000332395 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
DDX28-201ENST00000332395 ANKHD1Q8IWZ3 2542 aaKnown RBP14.09□□□□□ -0.15
DDX28-201ENST00000332395 RHOBP62745 196 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms