RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 JOSD1Q15040 202 aaPredicted RBP14.21□□□□□ -0.13
COL9A1-201ENST00000320755 TEX38Q6PEX7 206 aa14.21□□□□□ -0.13
COL9A1-201ENST00000320755 TMEM108Q6UXF1 575 aa14.21□□□□□ -0.13
COL9A1-201ENST00000320755 SLC25A48Q6ZT89 311 aaKnown RBP14.21□□□□□ -0.13
COL9A1-201ENST00000320755 A0A087X0M5 115 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 A0A1B0GX30 115 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 CRYBB3P26998 211 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 DIAPH2-AS1Q14236 149 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 HARBI1Q96MB7 349 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 ELOVL5Q9NYP7 299 aa14.21□□□□□ -0.14
COL9A1-201ENST00000320755 ITGB1BP1O14713 200 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 TYMSP04818 313 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 CBLN1P23435 193 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 DDTP30046 118 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 LCN2P80188 198 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 UHRF2Q96PU4 802 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 DPRXA6NFQ7 191 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 MT-CO2P00403 227 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 FRMD6-AS1P0C7T7 363 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 CEACAM8P31997 349 aaPredicted RBP14.2□□□□□ -0.14
COL9A1-201ENST00000320755 PKIAP61925 76 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 PRCDQ00LT1 54 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 BSPH1Q075Z2 132 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 FAM57AQ8TBR7 257 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 NEUROG1Q92886 237 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 C14orf144Q96I85 54 aa14.2□□□□□ -0.14
COL9A1-201ENST00000320755 A0A0G2JNJ9 132 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 DVL1O14640 695 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 NUPR1O60356 82 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 CD99P14209 185 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 ERVFC1-1P60608 527 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 RPL15P61313 204 aaKnown RBP14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRR20EP86478 221 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRR20CP86479 221 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRR20DP86480 221 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRR20BP86481 221 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRR20AP86496 221 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 PRB3Q04118 309 aaPredicted RBP14.19□□□□□ -0.14
COL9A1-201ENST00000320755 OR2T6Q8NHC8 308 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 TMEM18Q96B42 140 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 COMMD5Q9GZQ3 224 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 Q9UFV3 132 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 C16orf97H3BN30 126 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 C10orf55Q5SWW7 151 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 TMEM144Q7Z5S9 345 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 SLC45A2Q9UMX9 530 aa14.19□□□□□ -0.14
COL9A1-201ENST00000320755 NKX6-3A6NJ46 265 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 E7EUB6 86 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 FOXL1Q12952 345 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 ADIPOQQ15848 244 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 ASPHD1Q5U4P2 390 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 TNFRSF1AP19438 455 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 CD33P20138 364 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 SLC35B1P78383 322 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 COA6Q5JTJ3 125 aaKnown RBP14.18□□□□□ -0.14
COL9A1-201ENST00000320755 DOLPP1Q86YN1 238 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 OR10X1Q8NGY0 326 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 SAP30LQ9HAJ7 183 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 ZMAT5Q9UDW3 170 aaKnown RBP14.18□□□□□ -0.14
COL9A1-201ENST00000320755 ADMP35318 185 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 SUMO1P63165 101 aaKnown RBP14.18□□□□□ -0.14
COL9A1-201ENST00000320755 TXNDC17Q9BRA2 123 aa14.18□□□□□ -0.14
COL9A1-201ENST00000320755 C17orf100A8MU93 164 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 PRRG2O14669 202 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 TMEM200BQ69YZ2 307 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 LYPD2Q6UXB3 125 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 PQLC2Q6ZP29 291 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 ZNF664Q8N3J9 261 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 CORO2AQ92828 525 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 NCOR1P1Q9H4R4 102 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 TRAV5A0A0B4J249 113 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 HELTA6NFD8 242 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 APOA2P02652 100 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 ABHD17AQ96GS6 310 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 ZNF714Q96N38 554 aa14.17□□□□□ -0.14
COL9A1-201ENST00000320755 GATCO43716 136 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 FCN3O75636 299 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 APELAP0DMC3 54 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 FXYD3Q14802 87 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 EAF1Q96JC9 268 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 GAL3ST2Q9H3Q3 398 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 IGHV3-72A0A0B4J1Y9 119 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 IER3P46695 156 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 GNG4P50150 75 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 DLX1P56177 255 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 TCL1AP56279 114 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 POU2AF1Q16633 256 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 CENPWQ5EE01 88 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 OR5R1Q8NH85 324 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 RNASE7Q9H1E1 156 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 RNASE2P10153 161 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 PDLIM4P50479 330 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 SSBP2P81877 361 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 MORN5Q5VZ52 161 aa14.16□□□□□ -0.14
COL9A1-201ENST00000320755 RNASEH2CQ8TDP1 164 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 FLYWCH2Q96CP2 140 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 TECRQ9NZ01 308 aaKnown RBP14.16□□□□□ -0.14
COL9A1-201ENST00000320755 ZNF257Q9Y2Q1 563 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms