RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 C21orf140B9A014 251 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 TSPOP30536 169 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 UTF1Q5T230 341 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 NINJ1Q92982 152 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 C1orf159Q96HA4 380 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 MS4A5Q9H3V2 200 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 OBP2BQ9NPH6 170 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 B4GALT7Q9UBV7 327 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 BMI1P35226 326 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 FOXC1Q12948 553 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 Q56UQ5 140 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 Q8IYB0 196 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 OR4C5Q8NGB2 326 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 CLEC7AQ9BXN2 247 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
CRAT-201ENST00000318080 FCGR3BO75015 233 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 ESDP10768 282 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 ORAOV1Q8WV07 137 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 SMG1Q96Q15 3661 aaKnown RBP13.22□□□□□ -0.29
CRAT-201ENST00000318080 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 AHRRA9YTQ3 701 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 LYZL6O75951 148 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 ZBTB34Q8NCN2 500 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 HCFC1P51610 2035 aa13.22□□□□□ -0.29
CRAT-201ENST00000318080 CA2P00918 260 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
CRAT-201ENST00000318080 VAMP3Q15836 100 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 RPEL1Q2QD12 228 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 SSBP3Q9BWW4 388 aaPredicted RBP13.21□□□□□ -0.29
CRAT-201ENST00000318080 V9GYV3 84 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 CGAP01215 116 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 EDDM3AQ14507 147 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.29
CRAT-201ENST00000318080 TET2Q6N021 2002 aaPredicted RBP13.21□□□□□ -0.3
CRAT-201ENST00000318080 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 HEATR1Q9H583 2144 aaKnown RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 HES4Q9HCC6 221 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 SVILO95425 2214 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 BMPR1BO00238 502 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 AGFG2O95081 481 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 CRYBB3P26998 211 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 GPR6P46095 362 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 Q0VG73 95 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 PDLIM3Q53GG5 364 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 TSKUQ8WUA8 353 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 CORO2AQ92828 525 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 KCNS1Q96KK3 526 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 GGTLC1Q9BX51 225 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 STAG3L2P0CL84 134 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 CD24P25063 80 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 MEOX1P50221 254 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 TMEM136Q6ZRR5 245 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 ZNF738Q8NE65 137 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 FAM168AQ92567 244 aa13.2□□□□□ -0.3
CRAT-201ENST00000318080 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
CRAT-201ENST00000318080 WISP2O76076 250 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 C1orf229Q6ZS94 237 aaPredicted RBP13.19□□□□□ -0.3
CRAT-201ENST00000318080 OR4P4Q8NGL7 312 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 TAAR6Q96RI8 345 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 MGST1P10620 155 aaKnown RBP13.19□□□□□ -0.3
CRAT-201ENST00000318080 MYOD1P15172 320 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 ZNF718Q3SXZ3 478 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 ACP7Q6ZNF0 438 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 WFDC8Q8IUA0 241 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 RAB1CQ92928 201 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
CRAT-201ENST00000318080 PRSS46E5RG02 174 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 IGLL1P15814 213 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 DUTP33316 252 aaKnown RBP13.18□□□□□ -0.3
CRAT-201ENST00000318080 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 SPRR3Q9UBC9 169 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 TNCP24821 2201 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 PSG1P11464 419 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 IGHV1-2P23083 117 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
CRAT-201ENST00000318080 GCHFRP30047 84 aa13.18□□□□□ -0.3
CRAT-201ENST00000318080 PRRX1P54821 245 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms