RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 HLA-DRB1P01911 266 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 FAM74A4Q5TZK3 123 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 OR52E5Q8NH55 327 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 AHCTF1Q8WYP5 2266 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 NPIPB6E9PJ23 425 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 CBLN1P23435 193 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 ZNF385CQ66K41 422 aaPredicted RBP14.38□□□□□ -0.11
CDCP1-201ENST00000296129 AMMECR1LQ6DCA0 310 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 GTF3AQ92664 365 aaKnown RBP14.38□□□□□ -0.11
CDCP1-201ENST00000296129 CARHSP1Q9Y2V2 147 aaKnown RBP14.38□□□□□ -0.11
CDCP1-201ENST00000296129 PEX7O00628 323 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 MPZP25189 248 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 SAPCD1Q5SSQ6 148 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 PNRC2Q9NPJ4 139 aaKnown RBP14.38□□□□□ -0.11
CDCP1-201ENST00000296129 PLSCR4Q9NRQ2 329 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 THBDP07204 575 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 GPX4P36969 197 aaPredicted RBP14.37□□□□□ -0.11
CDCP1-201ENST00000296129 HERPUD1Q15011 391 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 LBHQ53QV2 105 aaPredicted RBP14.37□□□□□ -0.11
CDCP1-201ENST00000296129 SLC17A3O00476 420 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 CA7P43166 264 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 HBBP68871 147 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 NBR2O15453 112 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 GPR61Q9BZJ8 451 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 RPL24P83731 157 aaKnown RBP14.37□□□□□ -0.11
CDCP1-201ENST00000296129 BMPERQ8N8U9 685 aa14.37□□□□□ -0.11
CDCP1-201ENST00000296129 C5orf63A6NC05 138 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 CACNG8Q8WXS5 425 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 TIMP3P35625 211 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 SRSF6Q13247 344 aaKnown RBP14.36□□□□□ -0.11
CDCP1-201ENST00000296129 ZNF56Q15929 161 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 CD24P25063 80 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 CD55P08174 381 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 CD69Q07108 199 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 FAM159AQ6UWV7 190 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 RP1P56715 2156 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 OR9G9P0C7N8 305 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 C19orf54Q5BKX5 351 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 KLK15Q9H2R5 256 aa14.36□□□□□ -0.11
CDCP1-201ENST00000296129 H3BVH4 76 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 TCF24Q7RTU0 167 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 MDS2Q8NDY4 140 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 H0YIZ8 118 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 IL18BPO95998 194 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 PMCHL1Q16048 86 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 CDX1P47902 265 aaPredicted RBP14.35□□□□□ -0.11
CDCP1-201ENST00000296129 TGFAP01135 160 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 PF4P02776 101 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 UQCRFS1P47985 274 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 A8MXK9 166 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 DMRTA2Q96SC8 542 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 IL36BQ9NZH7 164 aa14.35□□□□□ -0.11
CDCP1-201ENST00000296129 TSC2P49815 1807 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 OR10AG1Q8NH19 301 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 CIDEAO60543 219 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
CDCP1-201ENST00000296129 FMC1Q96HJ9 113 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 RALGAPA1Q6GYQ0 2036 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 FOLR2P14207 255 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 GCSHP23434 173 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 COLCA1Q6ZS62 124 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 A0A0G2JLM5 398 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 B3GALT5-AS1P59052 145 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 PET117Q6UWS5 81 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 Q9H3A6 140 aa14.34□□□□□ -0.11
CDCP1-201ENST00000296129 HINT1P49773 126 aaPredicted RBP14.33□□□□□ -0.11
CDCP1-201ENST00000296129 OR4D5Q8NGN0 318 aa14.33□□□□□ -0.11
CDCP1-201ENST00000296129 TRBV20OR9-2A0A075B6H5 130 aa14.33□□□□□ -0.12
CDCP1-201ENST00000296129 IGHV3-11P01762 117 aa14.33□□□□□ -0.12
CDCP1-201ENST00000296129 TMEM144Q7Z5S9 345 aa14.33□□□□□ -0.12
CDCP1-201ENST00000296129 DNAJC13O75165 2243 aa14.33□□□□□ -0.12
CDCP1-201ENST00000296129 WFDC1Q9HC57 220 aa14.33□□□□□ -0.12
CDCP1-201ENST00000296129 ARHGEF17Q96PE2 2063 aaPredicted RBP14.33□□□□□ -0.12
CDCP1-201ENST00000296129 LDLRAD4O15165 306 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 SELLP14151 372 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 SRSF3P84103 164 aaKnown RBP14.32□□□□□ -0.12
CDCP1-201ENST00000296129 MUC21A0A0G2JKD1 596 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 MUC21A0A140T8X8 626 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 FAM181BA6NEQ2 426 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 FOXA3P55318 350 aaPredicted RBP14.32□□□□□ -0.12
CDCP1-201ENST00000296129 MUC21Q5SSG8 566 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 RNF144BQ7Z419 303 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 RAB37Q96AX2 223 aa14.32□□□□□ -0.12
CDCP1-201ENST00000296129 TCF20Q9UGU0 1960 aaKnown RBP14.32□□□□□ -0.12
CDCP1-201ENST00000296129 C9JCJ5 164 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 ATOH7Q8N100 152 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 ALPK2Q86TB3 2170 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 SRSF7Q16629 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDCP1-201ENST00000296129 IMMP2LQ96T52 175 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 SLC25A15Q9Y619 301 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 F8VVB4 439 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 F8VWA3 439 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 SDF2L1Q9HCN8 221 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 C7orf71A4D174 169 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 COL5A1-AS1Q5SY13 56 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 MIEN1Q9BRT3 115 aa14.31□□□□□ -0.12
CDCP1-201ENST00000296129 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
CDCP1-201ENST00000296129 SRRM5B3KS81 715 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms