RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 KIR2DL1P43626 348 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 KIR2DL2P43627 348 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 RPL23P62829 140 aaKnown RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 GP6Q9HCN6 339 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 TRAV8-1A0A0A6YYK1 113 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 HRKO00198 91 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 TSPAN2O60636 221 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 UPK3AO75631 287 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 CLDN14O95500 239 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 ZNF83P51522 516 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 KLRB1Q12918 225 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 DEFB109BQ30KR1 87 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 FADS6Q8N9I5 356 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR2I1PQ8NGU4 316 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 FLYWCH2Q96CP2 140 aaKnown RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 IGKV1-8A0A0C4DH67 115 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 C9orf40Q8IXQ3 194 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 HIGD1AQ9Y241 93 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 KLHDC2Q9Y2U9 406 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 K7EQS6 105 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 TMPRSS2O15393 492 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 LYZL6O75951 148 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 RPRMQ9NS64 109 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 SELENOKQ9Y6D0 94 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 INO80CQ6PI98 192 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR51G1Q8NGK1 321 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 PRSS27Q9BQR3 290 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 IGHV3-43A0A0B4J1X8 118 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 M0R3E3 92 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 IGHV3-43DP0DP04 118 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 HOXA4Q00056 320 aaPredicted RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR11H12B2RN74 326 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 C21orf140B9A014 251 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 IGLC2P0DOY2 106 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 IGLC3P0DOY3 106 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 DLX1P56177 255 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 SOX8P57073 446 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 C5orf47Q569G3 176 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 CCDC144NLQ6NUI1 221 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR11H1Q8NG94 326 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 OR11H2Q8NH07 326 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 ZPLD1Q8TCW7 415 aa4.88□□□□□ -1.63
VCAN-201ENST00000265077 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
VCAN-201ENST00000265077 C2CD4DB7Z1M9 353 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 IFITM1P13164 125 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 LIFP15018 202 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 C16orf47Q6ZP98 133 aaPredicted RBP4.87□□□□□ -1.63
VCAN-201ENST00000265077 NPVFQ9HCQ7 196 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 A0A087X0K7 114 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CDKN1AP38936 164 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 GUSBP11Q6P575 273 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TCF24Q7RTU0 167 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 ZNF645Q8N7E2 425 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 ZNF721Q8TF20 911 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 SPSB4Q96A44 273 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 RNF126Q9BV68 326 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 J3QW42 95 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 ITGBL1O95965 494 aaPredicted RBP4.87□□□□□ -1.63
VCAN-201ENST00000265077 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 A0A1W2PR80 420 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 A8MWV9 139 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 F8W1H4 67 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TTC9CQ8N5M4 171 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CYTL1Q9NRR1 136 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TMEM56-RWDD3S4R434 201 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 KIAA1671Q9BY89 1806 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CEACAM18A8MTB9 384 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 ARL14EPLP0DKL9 152 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CD40P25942 277 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CA7P43166 264 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 ZNF137PP52743 207 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 MST1LQ2TV78 715 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 CTHRC1Q96CG8 243 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 WNT16Q9UBV4 365 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TNS1Q9HBL0 1735 aaKnown RBP4.87□□□□□ -1.63
VCAN-201ENST00000265077 FCN3O75636 299 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 MEIG1Q5JSS6 88 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TDHQ8IZJ6 230 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 PLPPR2Q96GM1 343 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 GGTLC1Q9BX51 225 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 NTN1O95631 604 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 OR9G9P0C7N8 305 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TNXAQ16473 311 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 FAM222BQ8WU58 562 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 JMJD1CQ15652 2540 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 IGHV1OR15-9A0A0B4J2B8 117 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TMEM50AO95807 157 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TPRX1Q8N7U7 411 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 PRDM14Q9GZV8 571 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 RABAC1Q9UI14 185 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 TRAV8-4A0A0B4J246 113 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 GFRA1P56159 465 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 RAB1CQ92928 201 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 MGST2Q99735 147 aa4.87□□□□□ -1.63
VCAN-201ENST00000265077 HES7Q9BYE0 225 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms