RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
CCDC47-201ENST00000225726 WDR83OSQ9Y284 106 aa11.97□□□□□ -0.49
CCDC47-201ENST00000225726 OOSP1A8MZH6 123 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 SNCAP37840 140 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 HABP2Q14520 560 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-201ENST00000225726 LHFPL4Q7Z7J7 247 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 TPSG1Q9NRR2 321 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 MAS1LP35410 378 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 TMEM41BQ5BJD5 291 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 MMD2Q8IY49 270 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 CFHR4Q92496 578 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 HILPDAQ9Y5L2 63 aa11.96□□□□□ -0.49
CCDC47-201ENST00000225726 C17orf112F2Z3M2 114 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 VENTXO95231 258 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 H2AFB1P0C5Y9 115 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 CNTFRP26992 372 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 ERHP84090 104 aaKnown RBP11.96□□□□□ -0.5
CCDC47-201ENST00000225726 PRSS8Q16651 343 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 TMEM68Q96MH6 324 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 UBR5O95071 2799 aaPredicted RBP11.96□□□□□ -0.5
CCDC47-201ENST00000225726 FLNCQ14315 2725 aa11.96□□□□□ -0.5
CCDC47-201ENST00000225726 SRSF3P84103 164 aaKnown RBP11.95□□□□□ -0.5
CCDC47-201ENST00000225726 CCDC144NLQ6NUI1 221 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 ZNF709Q8N972 641 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 OR10W1Q8NGF6 305 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 SIGLEC9Q9Y336 463 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 SMCO3A2RU48 225 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 BTBD17A6NE02 478 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 FAM157AC9JC47 383 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 FNDC10F2Z333 226 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 MPDU1O75352 247 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
CCDC47-201ENST00000225726 TBL2Q9Y4P3 447 aaKnown RBP11.95□□□□□ -0.5
CCDC47-201ENST00000225726 IGHV4-61A0A0C4DH41 118 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 A0A1B0GV50 99 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 CLN5O75503 358 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 LGALS4P56470 323 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 DSCR9P59020 149 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 VSIRQ9H7M9 311 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 RPRMQ9NS64 109 aa11.95□□□□□ -0.5
CCDC47-201ENST00000225726 METTL1Q9UBP6 276 aaKnown RBP11.95□□□□□ -0.5
CCDC47-201ENST00000225726 TMEM218A2RU14 115 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 HBE1P02100 147 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
CCDC47-201ENST00000225726 UBE2E1P51965 193 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 RAB2AP61019 212 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 SPSB3Q6PJ21 355 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 PERPQ96FX8 193 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 CD5P06127 495 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 ELLP55199 621 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-201ENST00000225726 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 E7EUB6 86 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
CCDC47-201ENST00000225726 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
CCDC47-201ENST00000225726 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 IGHV4-30-2A0A087WSY4 118 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 A0A1B0GW64 132 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 MOSP00540 346 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 ARSJQ5FYB0 599 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-201ENST00000225726 FFAR4Q5NUL3 377 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 PPP1R27Q86WC6 154 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 PBDC1Q9BVG4 233 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
CCDC47-201ENST00000225726 ACTL6BO94805 426 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 RPL27AP46776 148 aaKnown RBP11.92□□□□□ -0.5
CCDC47-201ENST00000225726 TNXAQ16473 311 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 GUK1Q16774 197 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 NRGNQ92686 78 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-201ENST00000225726 BPIFB3P59826 476 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 WT1-ASQ06250 92 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 HNF4GQ14541 408 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 PEA15Q15121 130 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 SCRT1Q9BWW7 348 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 FBXL15Q9H469 300 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 IGKV1D-33P01593 117 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 IGKV1-33P01594 117 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 SMIM6P0DI80 62 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 SUB1P53999 127 aaKnown RBP eCLIP11.92□□□□□ -0.59e-7■■■□□ 17.7
CCDC47-201ENST00000225726 NPBQ8NG41 125 aa11.92□□□□□ -0.5
CCDC47-201ENST00000225726 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
CCDC47-201ENST00000225726 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
CCDC47-201ENST00000225726 MYO18BQ8IUG5 2567 aa11.91□□□□□ -0.5
CCDC47-201ENST00000225726 PAX8Q06710 450 aa11.91□□□□□ -0.5
CCDC47-201ENST00000225726 ZNF726P1Q15940 193 aa11.91□□□□□ -0.5
CCDC47-201ENST00000225726 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
CCDC47-201ENST00000225726 OR2T10Q8NGZ9 312 aa11.91□□□□□ -0.5
CCDC47-201ENST00000225726 MGST2Q99735 147 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms