RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 DYNAPQ8N1N2 210 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 TMEM86AQ8N2M4 240 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 C10orf105Q8TEF2 133 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 KLK6Q92876 244 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 NYNRINQ9P2P1 1898 aaKnown RBP0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 RIMBP3CA6NJZ7 1639 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 RIMBP3BA6NNM3 1639 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 RIMBP3Q9UFD9 1639 aa0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 DICER1Q9UPY3 1922 aaKnown RBP0.67□□□□□ -2.3
RPRD1A-210ENST00000591994 MEIKINA0A087WXM9 373 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 SRP19P09132 144 aaKnown RBP0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 SULT1A3P0DMM9 295 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 SULT1A4P0DMN0 295 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 KCNE1P15382 129 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 MARCKSL1P49006 195 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 GUK1Q16774 197 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 CD200R1LQ6Q8B3 271 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 OTUD6BQ8N6M0 293 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 C15orf53Q8NAA6 179 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 CNBD2Q96M20 576 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 FAM96AQ9H5X1 160 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 TOP2BQ02880 1626 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 ARFGEF3Q5TH69 2177 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 TGOLN2O43493 480 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 UBBP0CG47 229 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 MYL12AP19105 171 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 COQ5Q5HYK3 327 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 GPR32P1Q8NGA4 272 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 RETNLBQ9BQ08 111 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 CYSTM1Q9H1C7 97 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 CISHQ9NSE2 258 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 IL36BQ9NZH7 164 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 RSL24D1Q9UHA3 163 aaKnown RBP0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 FLG2Q5D862 2391 aaPredicted RBP0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 NAV1Q8NEY1 1877 aa0.66□□□□□ -2.3
RPRD1A-210ENST00000591994 IGKV3D-7A0A0C4DH55 119 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 IGKV3OR2-268A0A0C4DH90 116 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 A0A0J9YY10 115 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 A0A1B0GX78 115 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 SLC22A1O15245 554 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 IGHV3-7P01780 117 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 ISG15P05161 165 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 MSMBP08118 114 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 RPSAP08865 295 aaKnown RBP0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 FGF6P10767 208 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 UCHL3P15374 230 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 SUPT4H1P63272 117 aaKnown RBP0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 CAV1Q03135 178 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 RPL18Q07020 188 aaKnown RBP0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 CDK5R1Q15078 307 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 C10orf67Q8IYJ2 551 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 OR8B3Q8NGG8 313 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 MBD3L1Q8WWY6 194 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 PTH2Q96A98 100 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 ROPN1LQ96C74 230 aa0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 PARD6GQ9BYG4 376 aaPredicted RBP0.65□□□□□ -2.3
RPRD1A-210ENST00000591994 WDR90Q96KV7 1748 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 TRBV20OR9-2A0A075B6H5 130 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 TRBV10-2A0A0K0K1G8 114 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 TRAPPC13A5PLN9 417 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 ACOX3O15254 700 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 EIF2B2P49770 351 aaKnown RBP0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 AP2S1P53680 142 aaPredicted RBP0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 PMAIP1Q13794 54 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 ELOBQ15370 118 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 SURF2Q15527 256 aaPredicted RBP0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 KISS1Q15726 138 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 UNQ6190/PRO20217Q6UXQ8 127 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 ADAT1Q9BUB4 502 aaKnown RBP0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 EFCAB1Q9HAE3 211 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 CMTM6Q9NX76 183 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 LHFPL6Q9Y693 200 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 PTPRBP23467 1997 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 RYR3Q15413 4870 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 NHSL1Q5SYE7 1610 aa0.65□□□□□ -2.31
RPRD1A-210ENST00000591994 TGIF2-C20orf24A0A0A6YYL0 155 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 F8W036 122 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 NOS1APO75052 506 aaPredicted RBP0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 PRM2P04554 102 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 RPS4Y1P22090 263 aaKnown RBP0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 RAB5BP61020 215 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 HIST2H3PS2Q5TEC6 136 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 GLT8D1Q68CQ7 371 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 BAIAP2Q9UQB8 552 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 TECTAO75443 2155 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 MED12LQ86YW9 2145 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 POLEQ07864 2286 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 PMP2P02689 132 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 C1QAP02745 245 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 CALB1P05937 261 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 GRK1Q15835 563 aa0.64□□□□□ -2.31
RPRD1A-210ENST00000591994 ALKAL1Q6UXT8 129 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms