RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CD37P11049 281 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TDGF1P13385 188 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CTSEP14091 401 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CRISP2P16562 243 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 IL1RNP18510 177 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PPIBP23284 216 aaKnown RBP3.09□□□□□ -1.91
NUP88-213ENST00000576862 DDTP30046 118 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CD200P41217 278 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CXCL12P48061 93 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 BATFQ16520 125 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 DEFB134Q4QY38 66 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CLEC12AQ5QGZ9 265 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZFAND6Q6FIF0 208 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 UGT2A3Q6UWM9 527 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZFP2Q6ZN57 461 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 UBALD2Q8IYN6 164 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PACRGLQ8N7B6 248 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZNF283Q8N7M2 679 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CHST4Q8NCG5 386 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 OR52E2Q8NGJ4 325 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 OR51E1Q8TCB6 317 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 LMX1AQ8TE12 382 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TMEM54Q969K7 222 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 NEURL3Q96EH8 262 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ACY3Q96HD9 319 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TBX5Q99593 518 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 RARRES2Q99969 163 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 RSPO3Q9BXY4 272 aaPredicted RBP3.09□□□□□ -1.91
NUP88-213ENST00000576862 CHST5Q9GZS9 411 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 RNF167Q9H6Y7 350 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 FAM60AQ9NP50 221 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 CALML5Q9NZT1 146 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 NUMA1Q14980 2115 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 MYO9BQ13459 2157 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 A0A087WX48 190 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 A0A096LNJ9 63 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 A0A0B4J2A0 478 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 OR5H1A6NKK0 313 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 G3V2T6 193 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 K7ERU9 68 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 HMGN4O00479 90 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 DEGS1O15121 323 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 RGS5O15539 181 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 GGCTO75223 188 aaKnown RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 C1QBP02746 253 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 OPN1SWP03999 348 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SPI1P17947 270 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 NELFEP18615 380 aaKnown RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 GPR6P46095 362 aaPredicted RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 NCBP2P52298 156 aaKnown RBP eCLIP3.08□□□□□ -1.92
NUP88-213ENST00000576862 CRISP3P54108 245 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 GFERP55789 205 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SLC35A2P78381 396 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 CDK6Q00534 326 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 ZNF616Q08AN1 781 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 ELOCQ15369 112 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 DEFB133Q30KQ1 61 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 DEFB110Q30KQ9 67 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 C1orf194Q5T5A4 169 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 FAM162BQ5T6X4 162 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 TSPO2Q5TGU0 170 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SLC48A1Q6P1K1 146 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 XKRXQ6PP77 449 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 FA2HQ7L5A8 372 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 NEGR1Q7Z3B1 354 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 MRPL55Q7Z7F7 128 aaKnown RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 OOSP2Q86WS3 158 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 GKN2Q86XP6 184 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SLC25A45Q8N413 288 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 FTMTQ8N4E7 242 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SLC35G3Q8N808 338 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 ST6GALNAC3Q8NDV1 305 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 MFSD8Q8NHS3 518 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 APOBEC3DQ96AK3 386 aaPredicted RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 GALMQ96C23 342 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SULT4A1Q9BR01 284 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 TMEM70Q9BUB7 260 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 TBL1XR1Q9BZK7 514 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 YIPF3Q9GZM5 350 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 VCXQ9H320 206 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 OR51I2Q9H344 312 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 LYRM2Q9NU23 88 aaPredicted RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 KCNIP1Q9NZI2 227 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SS18L2Q9UHA2 77 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SHPKQ9UHJ6 478 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 MIA3Q5JRA6 1907 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 PLXNB3Q9ULL4 1909 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 SPTBN5Q9NRC6 3674 aaKnown RBP3.08□□□□□ -1.92
NUP88-213ENST00000576862 REV3LO60673 3130 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 XIRP2A4UGR9 3374 aa3.08□□□□□ -1.92
NUP88-213ENST00000576862 BDP1A6H8Y1 2624 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 TNRC18O15417 2968 aaPredicted RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 IGHV5-51A0A0C4DH38 117 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR5H14A6NHG9 310 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 D6RAR5 112 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms