RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RAB31Q13636 194 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 FXYD3Q14802 87 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 BATFQ16520 125 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 CENPWQ5EE01 88 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 PQLC2Q6ZP29 291 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 C9orf106Q8NAJ2 232 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 ENY2Q9NPA8 101 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 RNF114Q9Y508 228 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 RP1L1Q8IWN7 2480 aaPredicted RBP14.36□□□□□ -0.11
SCARF1-205ENST00000571272 IGHV2OR16-5A0A0B4J2B6 119 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 PCNX2A6NKB5 2137 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 TCL1AP56279 114 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 GCSAMQ8N6F7 178 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 OR4S2Q8NH73 311 aa14.36□□□□□ -0.11
SCARF1-205ENST00000571272 HELTA6NFD8 242 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 SRRM5B3KS81 715 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 TNFSF13O75888 250 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 GNG4P50150 75 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 MSMPQ1L6U9 139 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 TEX43Q6ZNM6 134 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 DDB2Q92466 427 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 C11orf52Q96A22 123 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 CALYQ9NYX4 217 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 NAT8BQ9UHF3 227 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 TRGV8A0A0C4DH27 118 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 C9JCJ5 164 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 HSPE1P61604 102 aaKnown RBP14.35□□□□□ -0.11
SCARF1-205ENST00000571272 CT45A1Q5HYN5 189 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 CT45A3Q8NHU0 189 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 VAMP8Q9BV40 100 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 GNB4Q9HAV0 340 aa14.35□□□□□ -0.11
SCARF1-205ENST00000571272 SAA2-SAA4A0A096LPE2 208 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 IGHV1-18A0A0C4DH31 117 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 SAA2P0DJI9 122 aaPredicted RBP14.34□□□□□ -0.11
SCARF1-205ENST00000571272 TNFSF10P50591 281 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 KRTDAPP60985 99 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 CFAP47Q6ZTR5 3102 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 OR10J4P0C629 311 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 LINC00869P0C866 280 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 TMEM183BQ1AE95 376 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 MIEN1Q9BRT3 115 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 GCM1Q9NP62 436 aa14.34□□□□□ -0.11
SCARF1-205ENST00000571272 TRAV9-1A0A075B6T8 112 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 F2RL2O00254 374 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 ESDP10768 282 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PRR20EP86478 221 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PRR20CP86479 221 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PRR20DP86480 221 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PRR20BP86481 221 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PRR20AP86496 221 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 MOGAT3Q86VF5 341 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 LYG1Q8N1E2 194 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 SIGLECL1Q8N7X8 197 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 PPP1R35Q8TAP8 253 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 NABP2Q9BQ15 211 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 FBXL7Q9UJT9 491 aa14.33□□□□□ -0.11
SCARF1-205ENST00000571272 DSCAMO60469 2012 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 ARFGEF3Q5TH69 2177 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
SCARF1-205ENST00000571272 OR7C2O60412 319 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 DUX4L9Q6RFH8 374 aaPredicted RBP14.33□□□□□ -0.12
SCARF1-205ENST00000571272 C20orf144Q9BQM9 153 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 PRO3102Q9H379 93 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 TMEM14BQ9NUH8 114 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 IDI2-AS1Q9NZ38 188 aa14.33□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF883P0CG24 379 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 CD59P13987 128 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 MLANAQ16655 118 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 BOD1L1Q8NFC6 3051 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 OR2V2Q96R30 315 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 RPLP1P05386 114 aaKnown RBP14.32□□□□□ -0.12
SCARF1-205ENST00000571272 COMPP49747 757 aaPredicted RBP14.32□□□□□ -0.12
SCARF1-205ENST00000571272 GUSBP1Q15486 140 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
SCARF1-205ENST00000571272 VHLLQ6RSH7 139 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 OR51B2Q9Y5P1 312 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 MAP1BP46821 2468 aaKnown RBP14.32□□□□□ -0.12
SCARF1-205ENST00000571272 PLCE1Q9P212 2302 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 CACNA1GO43497 2377 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 IGKV1OR2-108A0A075B7D4 117 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 KIR2DS2P43631 304 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 GNG10P50151 68 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 CCL11P51671 97 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 Q0VG73 95 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 HES3Q5TGS1 186 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 TMEM208Q9BTX3 173 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 IL19Q9UHD0 177 aa14.32□□□□□ -0.12
SCARF1-205ENST00000571272 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
SCARF1-205ENST00000571272 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 SPRY3O43610 288 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 AREGP15514 252 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
SCARF1-205ENST00000571272 MRPL54Q6P161 138 aaKnown RBP14.31□□□□□ -0.12
SCARF1-205ENST00000571272 NEUROG1Q92886 237 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 ZNF503Q96F45 646 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 TMEM68Q96MH6 324 aa14.31□□□□□ -0.12
SCARF1-205ENST00000571272 RCHY1Q96PM5 261 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms