RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 A0A0G2JRQ6 117 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 C13orf42A0A1B0GVH6 325 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
COMMD4-225ENST00000569245 MPTX1A8MV57 137 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 FCN1O00602 326 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 SIX6O95475 246 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 IL6RP08887 468 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-225ENST00000569245 GIPP09681 153 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-225ENST00000569245 CX3CL1P78423 397 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
COMMD4-225ENST00000569245 PSG5Q15238 335 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 AKAP14Q86UN6 197 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 LINC00482Q8N8I6 264 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 RHOVQ96L33 236 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 NEURL2Q9BR09 285 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 NMES1Q9C002 83 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 COA4Q9NYJ1 87 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
COMMD4-225ENST00000569245 A0A1B0GU03 582 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 CCL24O00175 119 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 CCNKO75909 580 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 PSMB8P28062 276 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-225ENST00000569245 IL15RAQ13261 267 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 IAH1Q2TAA2 248 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-225ENST00000569245 DEFB136Q30KP8 78 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 ETV3LQ6ZN32 361 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
COMMD4-225ENST00000569245 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
COMMD4-225ENST00000569245 ST6GAL2Q96JF0 529 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 PDCD10Q9BUL8 212 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 BET1LQ9NYM9 111 aa11.3□□□□□ -0.6
COMMD4-225ENST00000569245 TGP01266 2768 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PLXNB1O43157 2135 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 SLC25A17O43808 307 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PFDN1O60925 122 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PITX3O75364 302 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 SPDEFO95238 335 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 CNIH1O95406 144 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 CA2P00918 260 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
COMMD4-225ENST00000569245 UBE2KP61086 200 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 RAP2BP61225 183 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 GNB1P62873 340 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-225ENST00000569245 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 THOC7Q6I9Y2 204 aaKnown RBP11.29□□□□□ -0.6
COMMD4-225ENST00000569245 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 Q6ZRM9 215 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 ZBTB8BQ8NAP8 495 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-225ENST00000569245 OR4A5Q8NH83 315 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 RAX2Q96IS3 184 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
COMMD4-225ENST00000569245 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-225ENST00000569245 PRKDCP78527 4128 aaKnown RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 A0A1W2PN81 502 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 CRYGBP07316 175 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 FGF2P09038 288 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 CHRNA7P36544 502 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 NDPQ00604 133 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 DPF1Q92782 380 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 FYTTD1Q96QD9 318 aaKnown RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 P2RX4Q99571 388 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 GPR61Q9BZJ8 451 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-225ENST00000569245 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
COMMD4-225ENST00000569245 UPK2O00526 184 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 KBTBD11O94819 623 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 IGLV1-40P01703 118 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms