RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DBTP11182 482 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 ANXA8P13928 327 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RPA2P15927 270 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PRKACAP17612 351 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SERPINA2P20848 420 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PAICSP22234 425 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 CFL1P23528 166 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 HTR2CP28335 458 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SSTR5P35346 364 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TGFBR1P36897 503 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TGFBR2P37173 567 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 DDOSTP39656 456 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PTGFRP43088 359 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 KIR2DS4P43632 304 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 UBE2E1P51965 193 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 EFNB2P52799 333 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ATP1B3P54709 279 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RAB25P57735 213 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR10A3P58181 314 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ACTR3P61158 418 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RPS11P62280 158 aaKnown RBP eCLIP0.78□□□□□ -2.28
SMG1-212ENST00000566328 GRB2P62993 217 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 GNG3P63215 75 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 IL5RAQ01344 420 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PJVKQ0ZLH3 352 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ST3GAL4Q11206 333 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HES1Q14469 280 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 GNMTQ14749 295 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ATXN7L3Q14CW9 347 aaPredicted RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 KISS1Q15726 138 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF181Q2M3W8 571 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 C2orf76Q3KRA6 126 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RPL39P5Q59GN2 51 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CT45A1Q5HYN5 189 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TEX30Q5JUR7 227 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CLVS2Q5SYC1 327 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SLX4IPQ5VYV7 408 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TMEM42Q69YG0 159 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 C12orf73Q69YU5 71 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PVRIGQ6DKI7 326 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 DNM1P34Q6PK57 102 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 GLIPR1L1Q6UWM5 242 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 FAM159AQ6UWV7 190 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF562Q6V9R5 426 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 GDPD3Q7L5L3 318 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SSX8Q7RTT4 187 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SLC36A1Q7Z2H8 476 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HDDC2Q7Z4H3 204 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 C6orf201Q7Z4U5 140 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ARPINQ7Z6K5 226 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TRAPPC6BQ86SZ2 158 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF573Q86YE8 665 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ACBD7Q8N6N7 88 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF676Q8N7Q3 588 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TMEM104Q8NE00 496 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 BPIFB6Q8NFQ5 453 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR5T1Q8NG75 326 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR4D6Q8NGJ1 314 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR52H1Q8NGJ2 320 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR4P4Q8NGL7 312 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR8J1Q8NGP2 316 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR13C9Q8NGT0 318 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR10Z1Q8NGY1 313 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR56B4Q8NH76 319 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR5AK2Q8NH90 309 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CT45A3Q8NHU0 189 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SGMS2Q8NHU3 365 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 NDNFQ8TB73 568 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TNFAIP8L1Q8WVP5 186 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 GHSRQ92847 366 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 EMG1Q92979 244 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 POP5Q969H6 163 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 ARL11Q969Q4 196 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RPUSD4Q96CM3 377 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 ASB9Q96DX5 294 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 NRBF2Q96F24 287 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SDSLQ96GA7 329 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CENPNQ96H22 339 aaPredicted RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 ABHD14BQ96IU4 210 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 OR10C1Q96KK4 312 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZNF714Q96N38 554 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 CNN2Q99439 309 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 GPER1Q99527 375 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HSPB9Q9BQS6 159 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 FAM103A1Q9BTL3 118 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 FAAP24Q9BTP7 215 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RTL8AQ9BWD3 113 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 SELENOIQ9C0D9 397 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 YIPF3Q9GZM5 350 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 FAM192AQ9GZU8 254 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 TLNRD1Q9H1K6 362 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ANKRD19PQ9H560 264 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 C16orf95Q9H693 158 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 RNF167Q9H6Y7 350 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 METTL8Q9H825 291 aaKnown RBP0.78□□□□□ -2.28
SMG1-212ENST00000566328 NEK6Q9HC98 313 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HES4Q9HCC6 221 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 HMG20AQ9NP66 347 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 ZC4H2Q9NQZ6 224 aa0.78□□□□□ -2.28
SMG1-212ENST00000566328 PAK1IP1Q9NWT1 392 aaPredicted RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms