RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SSC4DQ8WTU2 575 aa8.82□□□□□ -1
USB1-212ENST00000566082 OR8B2Q96RD0 313 aa8.82□□□□□ -1
USB1-212ENST00000566082 ZNF703Q9H7S9 590 aaPredicted RBP8.82□□□□□ -1
USB1-212ENST00000566082 LAMTOR2Q9Y2Q5 125 aa8.82□□□□□ -1
USB1-212ENST00000566082 AMMECR1Q9Y4X0 333 aaPredicted RBP8.82□□□□□ -1
USB1-212ENST00000566082 LNP1A1A4G5 178 aa8.82□□□□□ -1
USB1-212ENST00000566082 NTF4P34130 210 aa8.82□□□□□ -1
USB1-212ENST00000566082 HES1Q14469 280 aa8.82□□□□□ -1
USB1-212ENST00000566082 AGMATQ9BSE5 352 aa8.82□□□□□ -1
USB1-212ENST00000566082 ELOVL5Q9NYP7 299 aa8.82□□□□□ -1
USB1-212ENST00000566082 POLR3KQ9Y2Y1 108 aaPredicted RBP8.82□□□□□ -1
USB1-212ENST00000566082 ZNF891A8MT65 544 aaPredicted RBP8.81□□□□□ -1
USB1-212ENST00000566082 TNFSF13O75888 250 aa8.81□□□□□ -1
USB1-212ENST00000566082 CA1P00915 261 aaPredicted RBP8.81□□□□□ -1
USB1-212ENST00000566082 IGLV3-1P01715 115 aa8.81□□□□□ -1
USB1-212ENST00000566082 C8orf88P0DMB2 117 aa8.81□□□□□ -1
USB1-212ENST00000566082 VMA21Q3ZAQ7 101 aa8.81□□□□□ -1
USB1-212ENST00000566082 DNLZQ5SXM8 178 aa8.81□□□□□ -1
USB1-212ENST00000566082 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
USB1-212ENST00000566082 CALYQ9NYX4 217 aa8.81□□□□□ -1
USB1-212ENST00000566082 IGKV1-39P01597 117 aa8.81□□□□□ -1
USB1-212ENST00000566082 IGKV1D-39P04432 117 aa8.81□□□□□ -1
USB1-212ENST00000566082 OR9G9P0C7N8 305 aa8.81□□□□□ -1
USB1-212ENST00000566082 NRN1LQ496H8 165 aa8.81□□□□□ -1
USB1-212ENST00000566082 EAF1Q96JC9 268 aaPredicted RBP8.81□□□□□ -1
USB1-212ENST00000566082 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
USB1-212ENST00000566082 THADAQ6YHU6 1953 aa8.81□□□□□ -1
USB1-212ENST00000566082 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
USB1-212ENST00000566082 hADV38S2A0JD32 116 aa8.81□□□□□ -1
USB1-212ENST00000566082 LEPROTL1O95214 131 aa8.81□□□□□ -1
USB1-212ENST00000566082 MAS1LP35410 378 aa8.81□□□□□ -1
USB1-212ENST00000566082 GPR6P46095 362 aaPredicted RBP8.81□□□□□ -1
USB1-212ENST00000566082 TDGF1P3P51864 188 aa8.81□□□□□ -1
USB1-212ENST00000566082 LYZP61626 148 aa8.81□□□□□ -1
USB1-212ENST00000566082 PRR31Q5SQ13 230 aa8.81□□□□□ -1
USB1-212ENST00000566082 FAM53AQ6NSI3 398 aaPredicted RBP8.81□□□□□ -1
USB1-212ENST00000566082 HAPLN4Q86UW8 402 aa8.81□□□□□ -1
USB1-212ENST00000566082 RNASEH2CQ8TDP1 164 aaKnown RBP8.81□□□□□ -1
USB1-212ENST00000566082 CRIM1Q9NZV1 1036 aa8.81□□□□□ -1
USB1-212ENST00000566082 RIF1Q5UIP0 2472 aaKnown RBP8.81□□□□□ -1
USB1-212ENST00000566082 SPTBN5Q9NRC6 3674 aaKnown RBP8.81□□□□□ -1
USB1-212ENST00000566082 REV3LO60673 3130 aa8.81□□□□□ -1
USB1-212ENST00000566082 FOXL1Q12952 345 aa8.8□□□□□ -1
USB1-212ENST00000566082 SRSF7Q16629 238 aaKnown RBP eCLIP8.8□□□□□ -1
USB1-212ENST00000566082 CCL17Q92583 94 aa8.8□□□□□ -1
USB1-212ENST00000566082 FAM122AQ96E09 287 aa8.8□□□□□ -1
USB1-212ENST00000566082 PGPA6NDG6 321 aa8.8□□□□□ -1
USB1-212ENST00000566082 SELLP14151 372 aa8.8□□□□□ -1
USB1-212ENST00000566082 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
USB1-212ENST00000566082 Q6ZS49 121 aa8.8□□□□□ -1
USB1-212ENST00000566082 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
USB1-212ENST00000566082 MOB3BQ86TA1 216 aa8.8□□□□□ -1
USB1-212ENST00000566082 OR1L8Q8NGR8 309 aa8.8□□□□□ -1
USB1-212ENST00000566082 CCL13Q99616 98 aa8.8□□□□□ -1
USB1-212ENST00000566082 TREML4Q6UXN2 200 aa8.8□□□□□ -1
USB1-212ENST00000566082 ACP7Q6ZNF0 438 aa8.8□□□□□ -1
USB1-212ENST00000566082 C19orf35Q6ZS72 473 aa8.8□□□□□ -1
USB1-212ENST00000566082 OR8B3Q8NGG8 313 aa8.8□□□□□ -1
USB1-212ENST00000566082 GNB4Q9HAV0 340 aa8.8□□□□□ -1
USB1-212ENST00000566082 HIF1ANQ9NWT6 349 aa8.8□□□□□ -1
USB1-212ENST00000566082 PCNX1Q96RV3 2341 aa8.8□□□□□ -1
USB1-212ENST00000566082 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
USB1-212ENST00000566082 CSN1S1P47710 185 aa8.8□□□□□ -1
USB1-212ENST00000566082 UQCRFS1P47985 274 aa8.8□□□□□ -1
USB1-212ENST00000566082 LHX2P50458 406 aa8.8□□□□□ -1
USB1-212ENST00000566082 EFNB3Q15768 340 aa8.8□□□□□ -1
USB1-212ENST00000566082 OR8A1Q8NGG7 326 aa8.8□□□□□ -1
USB1-212ENST00000566082 PGLYRP4Q96LB8 373 aa8.8□□□□□ -1
USB1-212ENST00000566082 GGTLC1Q9BX51 225 aa8.8□□□□□ -1
USB1-212ENST00000566082 SEPSECSQ9HD40 501 aaKnown RBP8.8□□□□□ -1
USB1-212ENST00000566082 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
USB1-212ENST00000566082 SCGB2A1O75556 95 aa8.79□□□□□ -1
USB1-212ENST00000566082 TNXAQ16473 311 aa8.79□□□□□ -1
USB1-212ENST00000566082 DEFB109BQ30KR1 87 aa8.79□□□□□ -1
USB1-212ENST00000566082 FAM201AQ5SY85 155 aa8.79□□□□□ -1
USB1-212ENST00000566082 ATP1A1-AS1Q5TC04 95 aa8.79□□□□□ -1
USB1-212ENST00000566082 ITLN1Q8WWA0 313 aa8.79□□□□□ -1
USB1-212ENST00000566082 JPT1Q9UK76 154 aa8.79□□□□□ -1
USB1-212ENST00000566082 PILRBQ9UKJ0 227 aa8.79□□□□□ -1
USB1-212ENST00000566082 CHD3Q12873 2000 aaKnown RBP8.79□□□□□ -1
USB1-212ENST00000566082 A8MWL6 223 aa8.79□□□□□ -1
USB1-212ENST00000566082 CLDN18P56856 261 aa8.79□□□□□ -1
USB1-212ENST00000566082 KRTCAP3Q53RY4 240 aa8.79□□□□□ -1
USB1-212ENST00000566082 HCP5Q6MZN7 132 aa8.79□□□□□ -1
USB1-212ENST00000566082 KCNS1Q96KK3 526 aa8.79□□□□□ -1
USB1-212ENST00000566082 SSBP4Q9BWG4 385 aaPredicted RBP8.79□□□□□ -1
USB1-212ENST00000566082 NPSP0C0P6 89 aa8.79□□□□□ -1
USB1-212ENST00000566082 STAG3L2P0CL84 134 aa8.79□□□□□ -1
USB1-212ENST00000566082 STAG3L3P0CL85 134 aa8.79□□□□□ -1
USB1-212ENST00000566082 FOXF2Q12947 444 aa8.79□□□□□ -1
USB1-212ENST00000566082 PRSS8Q16651 343 aa8.79□□□□□ -1
USB1-212ENST00000566082 ACSF3Q4G176 576 aaPredicted RBP8.79□□□□□ -1
USB1-212ENST00000566082 LCN12Q6JVE5 192 aa8.79□□□□□ -1
USB1-212ENST00000566082 UBALD2Q8IYN6 164 aa8.79□□□□□ -1
USB1-212ENST00000566082 PPIAL4AQ9Y536 164 aa8.79□□□□□ -1
USB1-212ENST00000566082 TRAV17A0A0B4J275 112 aa8.78□□□□□ -1
USB1-212ENST00000566082 A0A1W2PN81 502 aa8.78□□□□□ -1
USB1-212ENST00000566082 ZNF324O75467 553 aaPredicted RBP8.78□□□□□ -1
USB1-212ENST00000566082 TRIOO75962 3097 aa8.78□□□□□ -1
USB1-212ENST00000566082 CDKN1AP38936 164 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms