RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 LOC107986453A0A1B0GWG9 222 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 C15orf62A8K5M9 175 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 SC5DO75845 299 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 NPPAP01160 153 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 MAS1P04201 325 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 RRM2P31350 389 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 ALDH3B2P48448 385 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 RBM11P57052 281 aaKnown RBP2.46□□□□□ -2.02
HERC1-211ENST00000560983 OR2B8PP59922 312 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 CXCR4P61073 352 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 WHAMMP3Q1A5X7 153 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 ACTL10Q5JWF8 245 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 C10orf55Q5SWW7 151 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 UBE2UQ5VVX9 321 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 IDO2Q6ZQW0 420 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 SSX6Q7RTT6 188 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 ZNF554Q86TJ5 538 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 TMEM116Q8NCL8 245 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 OR13C9Q8NGT0 318 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 OR52N1Q8NH53 320 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 OR52I2Q8NH67 350 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 GRAMD2BQ96HH9 432 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 SPIN2AQ99865 258 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 SPIN2BQ9BPZ2 258 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 C20orf24Q9BUV8 137 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 TMEM109Q9BVC6 243 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 ZNF430Q9H8G1 570 aaPredicted RBP2.46□□□□□ -2.02
HERC1-211ENST00000560983 HSF4Q9ULV5 492 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 MRPS16Q9Y3D3 137 aaKnown RBP2.46□□□□□ -2.02
HERC1-211ENST00000560983 YTHDF2Q9Y5A9 579 aaKnown RBP2.46□□□□□ -2.02
HERC1-211ENST00000560983 GMPPBQ9Y5P6 360 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 RFNGQ9Y644 331 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 TMEM14AQ9Y6G1 99 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3OR16-13A0A075B7E8 117 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3-74A0A0B4J1X5 117 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 TRAV2A0A0B4J234 112 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 A0A1W2PP11 408 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 F5H768 121 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 NDUFA4O00483 81 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 GABRPO00591 440 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 ITGB1BP1O14713 200 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 GPX5O75715 221 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 CDRT1O95170 752 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 ISG15P05161 165 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 GSTT2P0CG29 244 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 GSTT2BP0CG30 244 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 AREGP15514 252 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 PTBP1P26599 531 aaKnown RBP eCLIP2.45□□□□□ -2.029e-7■■■□□ 15.4
HERC1-211ENST00000560983 GNRHRP30968 328 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 UBE2KP61086 200 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 ACTR3P61158 418 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 DAD1P61803 113 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 PAFAH1B2P68402 229 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 CLINT1Q14677 625 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 RSU1Q15404 277 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 MPV17LQ2QL34 196 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 COQ5Q5HYK3 327 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 TRAT1Q6PIZ9 186 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 PQLC2Q6ZP29 291 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 Q6ZRU5 148 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 TCF24Q7RTU0 167 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 SLC25A42Q86VD7 318 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 SPAG16Q8N0X2 631 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 STX19Q8N4C7 294 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 CBR4Q8N4T8 237 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 ANKRD42Q8N9B4 389 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 AQP11Q8NBQ7 271 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 MNS1Q8NEH6 495 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 OR51A4Q8NGJ6 313 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 CIRBP-AS1Q8TBR5 109 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 MRPL30Q8TCC3 161 aaKnown RBP2.45□□□□□ -2.02
HERC1-211ENST00000560983 TNFAIP8L1Q8WVP5 186 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 ACOT12Q8WYK0 555 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 GALMQ96C23 342 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 PELI1Q96FA3 418 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 CXorf58Q96LI9 332 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 HARBI1Q96MB7 349 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 NEDD4LQ96PU5 975 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 RAB40CQ96S21 281 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 OPRPNQ99935 248 aaPredicted RBP2.45□□□□□ -2.02
HERC1-211ENST00000560983 IL1RAPQ9NPH3 570 aa2.45□□□□□ -2.02
HERC1-211ENST00000560983 OR2T8A6NH00 312 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 MCRIP1C9JLW8 97 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 K7EQG2 157 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 DNASE2O00115 360 aaPredicted RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 NME4O00746 187 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 MRASO14807 208 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 CA11O75493 328 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 TSHBP01222 138 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 PRM2P04554 102 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 ZNF735P0CB33 412 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 OCM2P0CE71 109 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 OCMP0CE72 109 aaPredicted RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 UBCP0CG48 685 aaKnown RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 HIST1H1BP16401 226 aaKnown RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 CAPGP40121 348 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 CDK5Q00535 292 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 IFFO1Q0D2I5 559 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 PPP1R8Q12972 351 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms