RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CD74P04233 296 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 CRYGCP07315 174 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 IL6RP08887 468 aaPredicted RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 TRAPPC2P0DI81 140 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TRAPPC2BP0DI82 140 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR13C7P0DN81 318 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 CTRB1P17538 263 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.87
SNX1-205ENST00000559339 TNFSF8P32971 234 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 G6PCP35575 357 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 MECP2P51608 486 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 AKR1C2P52895 323 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 SYNJ2BPP57105 145 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR2B8PP59922 312 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 KRTAP10-11P60412 298 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TNP2Q05952 138 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 CD69Q07108 199 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 EXOSC2Q13868 293 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TRIM16LQ309B1 348 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 PYDC2Q56P42 97 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 SPANXN2Q5MJ10 180 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 CTRB2Q6GPI1 263 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 ACSM6Q6P461 480 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 LHFPL1Q86WI0 220 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR9G4Q8NGQ1 327 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR1L6Q8NGR2 347 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 RNASE11Q8TAA1 199 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 LSM10Q969L4 123 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 RRNAD1Q96FB5 475 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 SCGB3A2Q96PL1 93 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 HINT2Q9BX68 163 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 FXYD6Q9H0Q3 95 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 MIXL1Q9H2W2 232 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 AKIP1Q9NQ31 210 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 MCUBQ9NWR8 336 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 GAR1Q9NY12 217 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 CACFD1Q9UGQ2 172 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 ZNF256Q9Y2P7 627 aaPredicted RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 KCNIP3Q9Y2W7 256 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 CEPT1Q9Y6K0 416 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 TEX50A0A1B0GTY4 177 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 ZNF320A2RRD8 509 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 C15orf61A6NNL5 157 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 E7EUB6 86 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 K7EIL1 84 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 GSTZ1O43708 216 aaPredicted RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 SCGB2A1O75556 95 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 IFNA17P01571 189 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 REG1AP05451 166 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 CLEC3BP05452 202 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 CTSDP07339 412 aaPredicted RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 ANXA3P12429 323 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 AREGP15514 252 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 PI3P19957 117 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 ARL3P36405 182 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 SNCAP37840 140 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 INPP1P49441 399 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 PPP5CP53041 499 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 RND3P61587 244 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 ERHP84090 104 aaKnown RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 DEFA5Q01523 94 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 KLF5Q13887 457 aaPredicted RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 ZNF585BQ52M93 769 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 LCN12Q6JVE5 192 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 SLC25A24Q6NUK1 477 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 PLET1Q6UQ28 207 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 CLEC19AQ6UXS0 136 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 GTSCR1Q86UQ5 136 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 SGPP2Q8IWX5 399 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 Q8N402 240 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 TOMM5Q8N4H5 51 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 GDPD1Q8N9F7 314 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 OR4D10Q8NGI6 311 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 OR13C8Q8NGS7 320 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 MARCH1Q8TCQ1 289 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 DEDD2Q8WXF8 326 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 MRGPRFQ96AM1 343 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 THAP7Q9BT49 309 aaPredicted RBP3.36□□□□□ -1.87
SNX1-205ENST00000559339 PLEKHA3Q9HB20 300 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 ENY2Q9NPA8 101 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 NDUFA4L2Q9NRX3 87 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 TMEM14BQ9NUH8 114 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 SIGLEC8Q9NYZ4 499 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 NDUFA13Q9P0J0 144 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 NSG2Q9Y328 171 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 SMAD5-AS1Q9Y6J3 95 aa3.36□□□□□ -1.87
SNX1-205ENST00000559339 TNCP24821 2201 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 TRAV3A0A0B4J244 114 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 WI2-2373I1.2A0A1W2PRP0 233 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 IGLC7A0M8Q6 106 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 ANKRD20A5PA0PJZ0 165 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 LGALS9O00182 355 aa3.35□□□□□ -1.87
SNX1-205ENST00000559339 CORTO00230 105 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms