RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SLCO1A2P46721 670 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 MAP3K7CLP57077 242 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 GNA12Q03113 381 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 STK38Q15208 465 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 GUK1Q16774 197 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 PDPK2PQ6A1A2 396 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 LCN15Q6UWW0 184 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ALKAL1Q6UXT8 129 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF550Q7Z398 422 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM251Q8N6I4 163 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 NATD1Q8N6N6 113 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF676Q8N7Q3 588 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 Q8N814 137 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM161BQ8NDZ6 487 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 OR7G1Q8NGA0 311 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 LRRC20Q8TCA0 184 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 HAVCR2Q8TDQ0 301 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF418Q8TF45 676 aaPredicted RBP-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TMA16Q96EY4 203 aaKnown RBP-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 RBP7Q96R05 134 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 CYTH2Q99418 400 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 SIKE1Q9BRV8 207 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 FAM103A1Q9BTL3 118 aaKnown RBP-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 SLC22A4Q9H015 551 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TRABDQ9H4I3 376 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 HES4Q9HCC6 221 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ZNHIT6Q9NWK9 470 aaKnown RBP-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 PAQR5Q9NXK6 330 aaPredicted RBP-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 COMMD9Q9P000 198 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 PRELID1Q9Y255 219 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TIMM9Q9Y5J7 89 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 CHD9Q3L8U1 2897 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 A0A1W2PP64 1363 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 TAF1LQ8IZX4 1826 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 ABCA4P78363 2273 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 MUC2Q02817 5179 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 MED13LQ71F56 2210 aa-0.11□□□□□ -2.43
FOXN3-216ENST00000557496 SYNRGQ9UMZ2 1314 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 FLNCQ14315 2725 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 HSPG2P98160 4391 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 A0A087WX48 190 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TRAV14DV4A0A0A6YYC5 116 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TRBV6-8A0A0A6YYG3 113 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 LOC100506127A0A0U1RQW1 187 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 C1orf232A0A0U1RR37 186 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 LINC00854A0A1B0GVQ3 168 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 FABP12A6NFH5 140 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IQCF5A8MTL0 148 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 B4DSR2 109 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 C21orf140B9A014 251 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 FTCDNL1E5RQL4 147 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 F8W036 122 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 M0R2N4 97 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 M0R378 163 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SDCBPO00560 298 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 INE1O15225 51 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 BIRC5O15392 142 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TOX3O15405 576 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 CCL25O15444 150 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 CREBL2O60519 120 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 LYZL6O75951 148 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IGKV1-5P01602 117 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IGHV3-7P01780 117 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ORM1P02763 201 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IVLP07476 585 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SULT1A3P0DMM9 295 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SULT1A4P0DMN0 295 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 UGT2B7P16662 529 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 RPS4Y1P22090 263 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 S100A7P31151 101 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 HOXA6P31267 233 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 NUP62P37198 522 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 CSN1S1P47710 185 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 EIF2B2P49770 351 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 RAB13P51153 203 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF80P51504 273 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 HADHBP55084 474 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 OR4D2P58180 307 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 DEFA1P59665 94 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 UBE2G2P60604 165 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 LRP2P98164 4655 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 PPP1R1AQ13522 171 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 PDE6HQ13956 83 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 Q3ZCU0 254 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 RNASE10Q5GAN6 216 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SYPL2Q5VXT5 272 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SFXN4Q6P4A7 337 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 DNM1P34Q6PK57 102 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF826PQ6ZT77 177 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 DCXRQ7Z4W1 244 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SLC13A5Q86YT5 568 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM86AQ8N2M4 240 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 LINC00311Q8N616 119 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 UBL4BQ8N7F7 174 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 OR52E4Q8NGH9 312 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 OR4C6Q8NH72 309 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 PFN4Q8NHR9 129 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms