RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PDLIM3Q53GG5 364 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 SPANXN5Q5MJ07 72 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 PRAMEF5Q5TYX0 476 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 FAM71F2Q6NXP2 309 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 DUX4L9Q6RFH8 374 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 BTNL8Q6UX41 500 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CLEC9AQ6UXN8 241 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 C1orf122Q6ZSJ8 110 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ZNF833PQ6ZTB9 187 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ZNF429Q86V71 674 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 CCDC28AQ8IWP9 274 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 ABHD12Q8N2K0 398 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 HSD17B11Q8NBQ5 300 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR10P1Q8NGE3 313 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR8B3Q8NGG8 313 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR10X1Q8NGY0 326 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR2G3Q8NGZ4 309 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR9G1Q8NH87 305 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 LYPD6BQ8NI32 183 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 DTD1Q8TEA8 209 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ITLN2Q8WWU7 325 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 LEAP2Q969E1 77 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 LHX4Q969G2 390 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 C5orf30Q96GV9 206 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 OR8B2Q96RD0 313 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 ZNF251Q9BRH9 671 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 GGACTQ9BVM4 153 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 PARD6GQ9BYG4 376 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 TMEM133Q9H2Q1 129 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 HRH4Q9H3N8 390 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 SMDT1Q9H4I9 107 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 HEYLQ9NQ87 328 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 NUP50Q9UKX7 468 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 PRNDQ9UKY0 176 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 EML6Q6ZMW3 1958 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 KIAA1549Q9HCM3 1950 aa3.61□□□□□ -1.83
SRP54-212ENST00000556992 NCOA6Q14686 2063 aaPredicted RBP3.61□□□□□ -1.83
SRP54-212ENST00000556992 RTTNQ86VV8 2226 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PTPRBP23467 1997 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 CREBBPQ92793 2442 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TRAV1-1A0A0B4J248 108 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PPIAL4CA0A0B4J2A2 164 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 A0A1B0GW64 132 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 A0A1W2PPE3 182 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TMEM218A2RU14 115 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LYNX1G3V0Z9 82 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 RNASEK-C17orf49H0YIS7 233 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 H7C2Y5 167 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 UPK2O00526 184 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 SLC31A2O15432 143 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PPIHO43447 177 aaKnown RBP3.6□□□□□ -1.83
SRP54-212ENST00000556992 SOX15O60248 233 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 MMP23AO75900 390 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 KBTBD11O94819 623 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 CRYZL1O95825 349 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 IFNA10P01566 189 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 IGHV2-70P01814 119 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 HBE1P02100 147 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 MBP02144 154 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 APOA2P02652 100 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LIPFP07098 398 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 METTL15P1P0C7V9 234 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PPIAL4GP0DN37 164 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 IGHV1-8P0DP01 117 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LYNX1P0DP58 116 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 IAPPP10997 89 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 CCL3L1P16619 93 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 M6PRP20645 277 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ATP6V0CP27449 155 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LGALS7P47929 136 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 GNG10P50151 68 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 EFNA4P52798 201 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 DVL1P1P54792 670 aaPredicted RBP3.6□□□□□ -1.83
SRP54-212ENST00000556992 DLX6P56179 175 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 RAB11AP62491 216 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 SLC38A11Q08AI6 406 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ZNF273Q14593 569 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 AKR1C8PQ5T2L2 129 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ZNF841Q6ZN19 808 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 TCF23Q7RTU1 214 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 CENPVQ7Z7K6 275 aaPredicted RBP3.6□□□□□ -1.83
SRP54-212ENST00000556992 ODF3L1Q8IXM7 274 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ZNF709Q8N972 641 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 ZNF383Q8NA42 475 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LY6G5BQ8NDX9 201 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 LFNGQ8NES3 379 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 OR4C13Q8NGP0 309 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 OR13D1Q8NGV5 346 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 OR4A5Q8NH83 315 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 VSTM2AQ8TAG5 236 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 C8orf46Q8TAG6 207 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 FLYWCH2Q96CP2 140 aaKnown RBP3.6□□□□□ -1.83
SRP54-212ENST00000556992 OR4C12Q96R67 309 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PCGF1Q9BSM1 259 aa3.6□□□□□ -1.83
SRP54-212ENST00000556992 PSMG3Q9BT73 122 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms